v1.1 03.04.09 Phosphorylation prediction results for Human papillomavirus type 6b

                                                                                                                  Total     Max
   Rank                                                                                                           Score     Score
 352/2881) gi|9626055|ref|NP_040297.1| E7 protein [Human papillomavirus type 6b]                                  41.959   24.851
 461/2881) gi|9626057|ref|NP_040299.1| regulatory protein E2 [Human papillomavirus type 6b]                       63.345   22.929
 536/2881) gi|9626056|ref|NP_040298.1| replication protein E1 [Human papillomavirus type 6b]                     106.376   21.901
1242/2881) gi|9626060|ref|NP_040302.1| E5b protein [Human papillomavirus type 6b]                                 16.182   16.182
2170/2881) gi|9626062|ref|NP_040304.1| major capsid protein L1 [Human papillomavirus type 6b]                     24.608   10.531
2668/2881) gi|9626061|ref|NP_040303.1| minor capsid protein L2 [Human papillomavirus type 6b]                     18.318    5.766


352/2881) score = 41.959 24.851 (total and max score)
>gi|9626055|ref|NP_040297.1| E7 protein [Human papillomavirus type 6b]
    1 MHGRHVTLKDIVLDLQPPDPVGLHCYEQLVDSSEDEVDEVDGQDSQPLKQHFQIVTCCCGCDSNVRLVVQCTETDIREVQQLLLGTLNIVCPICAPKT
                              CYEQLVDSSEDEVDE 24.851 (32)
                               YEQLVDSSEDEVDEV 12.622 (33)
                               YEQLVDSSEDEVDEV  4.485 (33)


461/2881) score = 63.345 22.929 (total and max score)
>gi|9626057|ref|NP_040299.1| regulatory protein E2 [Human papillomavirus type 6b]
    1 MEAIAKRLDACQEQLLELYEENSTDLHKHVLHWKCMRHESVLLYKAKQMGLSHIGMQVVPPLKVSEAKGHNAIEMQMHLESLLRTEYSMEPWTLQETSYE
                                                                                                      TSYEMWQTPPKRCFK  3.683 (104)
  101 MWQTPPKRCFKKRGKTVEVKFDGCANNTMDYVVWTDVYVQDNDTWVKVHSMVDAKGIYYTCGQFKTYYVNFVKEAEKYGSTKHWEVCYGSTVICSPASVS
                                                        MVDAKGIYYTCGQFK 11.282 (158)
  201 STTQEVSIPESTTYTPAQTSTLVSSSTKEDAVQTPPRKRARGVQQSPCNALCVAHIGPVDSGNHNLITNNHDQHQRRNNSNSSATPIVQFQGESNCLKCF
                                TKEDAVQTPPRKRAR 22.929 (234)                  QHQRRNNSNSSATPI 13.592 (280)
                                TKEDAVQTPPRKRAR 11.860 (234)
  301 RYRLNDRHRHLFDLISSTWHWASSKAPHKHAIVTVTYDSEEQRQQFLDVVKIPPTISHKLGFMSLHLL
      


536/2881) score = 106.376 21.901 (total and max score)
>gi|9626056|ref|NP_040298.1| replication protein E1 [Human papillomavirus type 6b]
    1 MADDSGTENEGSGCTGWFMVEAIVQHPTGTQISDDEDEEVEDSGYDMVDFIDDSNITHNSLEAQALFNRQEADTHYATVQDLKRKYLGSPYVSPINTIAE
                                           EEVEDSGYDMVDFID 12.791 (45)    RQEADTHYATVQDLK 21.901 (76)
                               HPTGTQISDDEDEEV 10.143 (33)                             LKRKYLGSPYVSPIN 13.186 (89)
                               HPTGTQISDDEDEEV  6.353 (33)
                               HPTGTQISDDEDEEV  4.135 (33)
  101 AVESEISPRLDAIKLTRQPKKVKRRLFQTRELTDSGYGYSEVEAGTGTQVEKHGVPENGGDGQEKDTGRDIEGEEHTEAEAPTNSVREHAGTAGILELLK
      
  201 CKDLRAALLGKFKECFGLSFIDLIRPFKSDKTTCLDWVVAGFGIHHSISEAFQKLIEPLSLYAHIQWLTNAWGMVLLVLLRFKVNKSRSTVARTLATLLN
      
  301 IPENQMLIEPPKIQSGVAALYWFRTGISNASTVIGEAPEWITRQTVIEHGLADSQFKLTEMVQWAYDNDICEESEIAFEYAQRGDFDSNARAFLNSNMQA
      
  401 KYVKDCATMCRHYKHAEMRKMSIKQWIKHRGSKIEGTGNWKPIVQFLRHQNIEFIPFLTKFKLWLHGTPKKNCIAIVGPPDTGKSYFCMSLISFLGGTVI
                                                                  FKLWLHGTPKKNCIA  2.590 (468)
  501 SHVNSSSHFWLQPLVDAKVALLDDATQPCWIYMDTYMRNLLDGNPMSIDRKHKALTLIKCPPLLVTSNIDITKEDKYKYLHTRVTTFTFPNPFPFDRNGN
                                                                           DITKEDKYKYLHTRV  0.228 (577)
  601 AVYELSNTNWKCFFERLSSSLDIQDSEDEEDGSNSQAFRCVPGTVVRTL
                        SSLDIQDSEDEEDGS 10.531 (626)
                        SSLDIQDSEDEEDGS  9.874 (626)
                        SSLDIQDSEDEEDGS  7.914 (626)
                        SSLDIQDSEDEEDGS  6.730 (626)


1242/2881) score = 16.182 16.182 (total and max score)
>gi|9626060|ref|NP_040302.1| E5b protein [Human papillomavirus type 6b]
    1 MMLTCQFNDGDTWLGLWLLCAFIVGMLGLLLMHYRAVQGDKHTKCKKCNKHNCNDDYVTMHYTTDGDYIYMN
                                                       KHNCNDDYVTMHYTT 16.182 (57)


2170/2881) score = 24.608 10.531 (total and max score)
>gi|9626062|ref|NP_040304.1| major capsid protein L1 [Human papillomavirus type 6b]
    1 MWRPSDSTVYVPPPNPVSKVVATDAYVTRTNIFYHASSSRLLAVGHPYFSIKRANKTVVPKVSGYQYRVFKVVLPDPNKFALPDSSLFDPTTQRLVWACT
        RPSDSTVYVPPPNPV 10.531 (10)
  101 GLEVGRGQPLGVGVSGHPFLNKYDDVENSGSGGNPGQDNRVNVGMDYKQTQLCMVGCAPPLGEHWGKGKQCTNTPVQAGDCPPLELITSVIQDGDMVDTG
      
  201 FGAMNFADLQTNKSDVPIDICGTTCKYPDYLQMAADPYGDRLFFFLRKEQMFARHFFNRAGEVGEPVPDTLIIKGSGNRTSVGSSIYVNTPSGSLVSSEA
      
  301 QLFNKPYWLQKAQGHNNGICWGNQLFVTVVDTTRSTNMTLCASVTTSSTYTNSDYKEYMRHVEEYDLQFIFQLCSITLSAEVMAYIHTMNPSVLEDWNFG
      
  401 LSPPPNGTLEDTYRYVQSQAITCQKPTPEKEKPDPYKNLSFWEVNLKEKFSSELDQYPLGRKFLLQSGYRGRSSIRTGVKRPAVSKASAAPKRKRAKTKR
                                  EKEKPDPYKNLSFWE  9.709 (436)
                         AITCQKPTPEKEKPD  6.205 (427)
           NGTLEDTYRYVQSQA -1.837 (413)


2668/2881) score = 18.318  5.766 (total and max score)
>gi|9626061|ref|NP_040303.1| minor capsid protein L2 [Human papillomavirus type 6b]
    1 MAHSRARRRKRASATQLYQTCKLTGTCPPDVIPKVEHNTIADQILKWGSLGVFFGGLGIGTGSGTGGRTGYVPLQTSAKPSITSGPMARPPVVVEPVAPS
                                                                                                     PVAPSDPSIVSLIEE  5.549 (103)
  101 DPSIVSLIEESAIINAGAPEIVPPAHGGFTITSSETTTPAILDVSVTSHTTTSIFRNPVFTEPSVTQPQPPVEANGHILISAPTVTSHPIEEIPLDTFVV
      
  201 SSSDSGPTSSTPVPGTAPRPRVGLYSRALHQVQVTDPAFLSTPQRLITYDNPVYEGEDVSVQFSHDSIHNAPDEAFMDIIRLHRPAIASRRGLVRYSRIG
         DSGPTSSTPVPGTAP  3.142 (211)          TPQRLITYDNPVYEG  4.028 (249)
                                                    ITYDNPVYEGEDVSV -0.168 (254)
  301 QRGSMHTRSGKHIGARIHYFYDISPIAQAAEEIEMHPLVAAQDDTFDIYAESFEPGINPTQHPVTNISDTYLTSTPNTVTQPWGNTTVPLSLPNDLFLQS
                                                                         SDTYLTSTPNTVTQP  5.766 (375)
  401 GPDITFPTAPMGTPFSPVTPALPTGPVFITGSGFYLHPAWYFARKRRKRIPLFFSDVAA