v1.1 03.04.09 Phosphorylation prediction results for Tioman virus

                                                                                                                  Total     Max
   Rank                                                                                                           Score     Score
 121/2881) gi|22003850|ref|NP_665871.1| RNA polymerase [Tioman virus]                                            120.056   31.224
 170/2881) gi|22003846|ref|NP_665867.1| W protein [Tioman virus]                                                  72.316   29.452
 171/2881) gi|22003844|ref|NP_665865.1| phosphoprotein [Tioman virus]                                            106.000   29.452
 172/2881) gi|22003845|ref|NP_665866.1| V protein [Tioman virus]                                                  77.422   29.452
 735/2881) gi|22003848|ref|NP_665869.1| fusion protein [Tioman virus]                                             30.807   19.811
 783/2881) gi|22003843|ref|NP_665864.1| nucleocapsid protein [Tioman virus]                                       69.158   19.284
1273/2881) gi|22003847|ref|NP_665868.1| matrix protein [Tioman virus]                                             31.808   16.039


121/2881) score = 120.056 31.224 (total and max score)
>gi|22003850|ref|NP_665871.1| RNA polymerase [Tioman virus]
    1 MACPEQVILPEVHLDSPIVRNKLLYYLKVGGLPTSDEGICDTLFPNISWDRVRREESRLSARLQKVRQLSYARLSSSVNSPRSPTANLDVEVILWPEIIP
      
  101 NLKRYILTSCLNRFADAEKCLISAMSPLVQGTKLLLSEMCKKVSGKDTLVTNNVKACRFHGQHTRPQSALDFCHIYDANEYKDAFYTWFLIRHQMRALIL
      
  201 KTQTNLSVDLITILDERDYCFIVTPELVTLVDRKETRMSYFTFEMTLMVTDMIEGRMNILAISSASCYLQPLKVNLRYLFDIVDQLCAILGQNVYSLIAN
      
  301 LESMVYAVLQLSDPVPDLKGEFLSFINSEIYTILTDSGEFTDCEAYAVIDKLNSCYLHLPADLVAELLCIMRLWGHPMLTSATAARKVRESMCAPKVIDL
                                            EFTDCEAYAVIDKLN  7.027 (346)
  401 TTNLKTLAFFNGIIINGYRRRHDGIWPNCTLPPFASLSLQELRHDNSELSYPYILAHWKEIAMLEFGKSIDADPGEDLSIFMKDKAISAPRKDWLSVFRK
      
  501 SLIKQQCEQCRISLPQPYNRRLLLNFLADETFDPSKELEYVTSGAYLDDDSFCASYSLKEKEIKETGRIFAKLTKNMRSCQVIAESLLAAHAGKFFKENG
                                      DPSKELEYVTSGAYL  8.899 (540)
  601 VVLDQISITKTLLTMSQIGIISKHSRRTTRNNITVLNKSERHHLGRHETNANLSSGKREVPNETTEITACFLTTDLSKYCLNWRYQSIILFAKSMNQLYG
      
  701 YNHLFEWIHLRLMRSTLYVGDPFNPPRNLTSADLDLVENGDIFIVSPRGGIEGLCQKLWTMISIAVIVLSATEAGTRVMSLVQGDNQAMAITTMVPRGLP
      
  801 HHEKKRIAYENSQTFIRRLRENNLGMGHHLKEQETIVSSEFLIYSKRIIYNGRILNQSLKNVSKLCLIADILGESTQTSCSNLATTVMRLTENGIEKDIC
      
  901 FFLNQYLTAKQLVFDLLFPLTKLFEDQTSSAFLDHPILVSRLITIPAQLGGLNYYALTRLFNRNIGDPLTSAIADLKRYIIAGMLPRWILKNLIAREPGD
      
 1001 GDWNTLASDPYALNIDYLYPPTTFLKKHAQRVLMEGSVNPMLSGVFSESNLPEENSLARFLLDRDIVMPRVAHIVLEQSVCGRKKQIQGYLDTTRTIIRY
      
 1101 AINRQPIGNAKLCKILDYNTSYLSYNLDYISTPVTCVTMSMSSSSLLKLCSIDLARLVRRLSWKSLLGGRQLDGLETPDPIELVEGALLTRGSACTHCMS
      
 1201 GNRKYTWFFVPAGIDITADPADNPPVRVPYIGSRTDERRVASMSYVKGSSSALKAALRLCGVYIWAFGDTEKNWADAAQLANTRAQLSLDQLHVLTPLPT
      
 1301 TANLTHRLDDGLTQQKFTPASSYMYSSYVHISNDDQNLEIQDRTVDSNLIYQQIMLLGLGIIETWLQLPNEINIEDSTLHLHTECSCCIKQVDACIINQV
      
 1401 EGNVPTLSIPQYNKFIYDTNPLTDQDLQDIDKLQFEAEISGIDAIPDQDKVRVLGHLTGLQLARSITGLDEVTSLMNDAIVEADYSANWISECLNTKLDD
                                                                                   DAIVEADYSANWISE  9.950 (1485)
 1501 TFLYAAWNLLLDLSYQLYYLRILGQNAILDYLSIVLSRIPGLALSGIAATISHPKILRRLINLEIVRPYNSPYLATLNYTKMTCDALMWGARHVLSNIRS
      
 1601 GFDIEIIIPSECSSELSDRVLNLIARKLSLLCCLTASHHELPHVRGLSPELKCKVLTEYLISKKNEYSITVGDVRGWETSILEPKISAFPCNIYYLTRKV
                                              LPHVRGLSPELKCKV  2.214 (1648)
 1701 LNYIRDSPFLQQQLADYYDIRSSVYSNIPVINNSTEGSDSEFPSTLCILDWLTPLFSQADKVTKFHTPLTDSSPMVKDLTLVDPPIHHVLRPVGLSSTSW
                                NIPVINNSTEGSDSE 24.086 (1734)
                                    INNSTEGSDSEFPST  4.775 (1738)
 1801 YKGLSVIKVLDTLPILSGNHLYLAEGSGAMMTVIESKYCGTKAFYNSLFSSGQNPPQRNFQPLPTQFMESIVYQNIRYEEDQIGTDEPFFVPLWSGSSEE
                                                                                               FVPLWSGSSEETDLS  8.975 (1897)
                                                                       QFMESIVYQNIRYEE  8.797 (1873)
 1901 TDLSCAACVNLILKSIPSRSVSIMNVDLEDITQMQNPEVSRAAINVILLSDILLMPGGVLIFKTYLSPFAKLSNFCKLLQIAFSRCVLLRSAYSDPASDE
      
 2001 VFLVAIKSDLRSLTGSFDEIANQSRTDDKSFTCIDPEILTQIIVNLNNQQQRVKNIINDQVRTGRCDVNIDDHIQLSRLGTSSQTPKILDLEIAFDFNDF
          AIKSDLRSLTGSFDE 31.224 (2012)
 2101 LTRVVQLLTTFLKEFISIHDDLATDRNSLLFDSYNLDRKGKLSTNNQIVTTHIMNLTARNWPLLPPAVNGQVRNNLELGIFQCSSIVSWEVFLDLTPIRK
      
 2201 HILKRIGSQIVRDLFTYHLIIKLDRSEQKRIWKAIGSVILSFTLDNDIPDHHPVLFEDPDTPEFDIFGEEL
      HILKRIGSQIVRDLF 14.109 (2208)


170/2881) score = 72.316 29.452 (total and max score)
>gi|22003846|ref|NP_665867.1| W protein [Tioman virus]
    1 MDPSPSDAEISAWIDKGLDTVEHFLSASTQSVRSLGKSTIKPGNTEELVAAAEKVAANTAKGILSGVRGTNPDPATRPKEKQKGSPVKMQHQEQESVYEE
                                                                                                HQEQESVYEEVIPTE 29.452 (98)
                                                                                   PKEKQKGSPVKMQHQ 16.941 (85)
                                                                                   PKEKQKGSPVKMQHQ  5.773 (85)
                                                                                              MQHQEQESVYEEVIP  2.250 (96)
  101 VIPTESAPLIPKTTPKKPPRNKEKVMSMMALSPPDESLDETHEAVFKRGEYLHHMAEAPPDRGTQAGNRHQLGNRNPAGHRMVQPNMSPNIPIHLQGNLP
                                   ALSPPDESLDETHEA 13.250 (137)
            APLIPKTTPKKPPRN  4.650 (114)
  201 VRVLSRCLLLV
      


171/2881) score = 106.000 29.452 (total and max score)
>gi|22003844|ref|NP_665865.1| phosphoprotein [Tioman virus]
    1 MDPSPSDAEISAWIDKGLDTVEHFLSASTQSVRSLGKSTIKPGNTEELVAAAEKVAANTAKGILSGVRGTNPDPATRPKEKQKGSPVKMQHQEQESVYEE
                                                                                                HQEQESVYEEVIPTE 29.452 (98)
                                                                                   PKEKQKGSPVKMQHQ 16.941 (85)
                                                                                   PKEKQKGSPVKMQHQ  5.773 (85)
                                                                                              MQHQEQESVYEEVIP  2.250 (96)
  101 VIPTESAPLIPKTTPKKPPRNKEKVMSMMALSPPDESLDETHEAVFKRGGVPPPHGRGATGQGDTGGKSPSAGQPEPRGSQNGATQYVTQYPNSPTGEPA
                                   ALSPPDESLDETHEA 13.250 (137)    QGDTGGKSPSAGQPE 15.726 (169)
            APLIPKTTPKKPPRN  4.650 (114)                                      GQPEPRGSQNGATQY 12.536 (180)
                                                                                            YVTQYPNSPTGEPAG  5.421 (194)
  201 GAGAVQMSAPCVREIMHYLQTLETRIANLDWKVDKLLSQQTTITQIKNDQHTIKASLATIEGLITTIKIMDPGVGPGATASQAKRIFKEAPVVISGPILG
      
  301 DNPIIGAEAIQLDELARPSPAKPRQVKQSGPSSSAIVGYKSTLQSLVKECISNPSMRQKFDLAISNIKSEQDFKQVRRDIIRSAT
      


172/2881) score = 77.422 29.452 (total and max score)
>gi|22003845|ref|NP_665866.1| V protein [Tioman virus]
    1 MDPSPSDAEISAWIDKGLDTVEHFLSASTQSVRSLGKSTIKPGNTEELVAAAEKVAANTAKGILSGVRGTNPDPATRPKEKQKGSPVKMQHQEQESVYEE
                                                                                                HQEQESVYEEVIPTE 29.452 (98)
                                                                                   PKEKQKGSPVKMQHQ 16.941 (85)
                                                                                   PKEKQKGSPVKMQHQ  5.773 (85)
                                                                                              MQHQEQESVYEEVIP  2.250 (96)
  101 VIPTESAPLIPKTTPKKPPRNKEKVMSMMALSPPDESLDETHEAVFKRGSTSTTWPRRHRTGGHRREIAISWATGTPRVTEWCNPICHPISQFTYRGTCR
                                   ALSPPDESLDETHEA 13.250 (137)
            APLIPKTTPKKPPRN  4.650 (114)        EAVFKRGSTSTTWPR  5.106 (150)
  201 CGCCPDVCSLCERDYALLADIRDPDCES
      


735/2881) score = 30.807 19.811 (total and max score)
>gi|22003848|ref|NP_665869.1| fusion protein [Tioman virus]
    1 MRIALTAVIVSIHFDLAFPMNKNSLLSVGLVHKSVKNLYFYSQGSPSYIVVKLVPTLGNVPGNCTLNSLVRYKSTVSSLLSPLAENLEYLQKTLTVSRGG
                                                                        NSLVRYKSTVSSLLS 19.811 (74)
  101 RRRRFAGVAIGLAALGVAAAAQATAAVALVEARQNAAQIQSLSEAIQNTNLAVNELKTAIGASATAIQAIQTQINEVINPAINRLSCEILDAQLASMLNL
      
  201 YLIHLTTVFQNQLTNPALTPLSIQSLQSLLQGTSSVLTNITSSSKLALNDALVTGLITGQVVGLNMTSLQIVIAAYVPSVAKLSNAVVHNFIRITTSVNG
      
  301 TEVIIQSPTIIMEQNEVMYDLKTGHCTESDLNIYCPYVDAQLLSPGMTNCINGRLNDCTFSKVVGSFPTRFAAVEGAILANCKYLQCNCLTPPYIITPLN
                 MEQNEVMYDLKTGHC 10.996 (319)
  401 GEMISMIDLSKCQRLDLGTIVFDINNPVNVTFNGNYRADVGQMIVTNPLDISAELNQINTSLSNAQGFLSKSDAWLHVSQWVTNSGTIFIILIIGLIVGI
      
  501 VYMIINTYVVVQIIKEINRMRTSDRAHLLKGSISSIST
      


783/2881) score = 69.158 19.284 (total and max score)
>gi|22003843|ref|NP_665864.1| nucleocapsid protein [Tioman virus]
    1 MSSVFRAFELFTLEQEQQELGNDIEIPPETLRSNIKVCILNSQDPQTRHDMMCFCLRLIASNSARAAHKTGAILTLLNLPTAMMQNHIRIADRSPDADIE
                                                                                            HIRIADRSPDADIER 12.572 (94)
  101 RIEVDGFEPGTYRLRPNARTPLTNGEITALSLMANDLPDTYTNDTPFTNHRAEGENCDETEQFLNAIYSVLVQLWVTVCKCMTAHDQPTGSDERRLAKYQ
      
  201 QQGRLDQKYALQPELRRQIQACIRGSLTIRQFLTYELQTARKQGAITGRYYAMVGDIGKYIDNAGMSAFFMTMRFALGTRWPPLALSAFSGELLKLKSLM
      
  301 QLYRNLGEKARYMALLEMPEMMEFAPANYPLCYSYAMGIGSVQDPMMRNYTFARPFLNPAYFQLGVETANRQQGSVDKSMAEELGLTEEERRDMSATVTR
                                                                         TANRQQGSVDKSMAE 16.072 (375)
                                                           RPFLNPAYFQLGVET  3.676 (361)
                                                                             QQGSVDKSMAEELGL  2.905 (379)
  401 LTTGRGAGQAQDMINIMGARQAAGGRGAQGRALRIVEEDETTDDESVDDQADDIQGRPLPPVPAPIREIDWEARIAEIEEQGQRMRDQGVGRLVDNQAPN
                                       RIVEEDETTDDESVD 19.284 (441)
                                        IVEEDETTDDESVDD 14.648 (442)
  501 VQNTRQNTQDNQALLDLDI
      


1273/2881) score = 31.808 16.039 (total and max score)
>gi|22003847|ref|NP_665868.1| matrix protein [Tioman virus]
    1 MALRQATIPINVDTESEKNNLNPFPIVPITKEDGSPTGRLVKQLRIKNLTPRGSTELPLTFINTYGFIKPLMTYTEFFSTHLRTPSCLTACMIPFGAGPF
      
  101 IENPHRILDKCDRVNIVVRKSASVKEEIIFDVRRLPPLFNRHQISGNRLICVPSEKYVKSPGKMIAGTDYAYQIAFVSLTFCPESQKFRVARPLQTIRSP
                                                          PSEKYVKSPGKMIAG 16.039 (160)
  201 IMRSVQLEVILKIDCAANSPLKRFLIISPNSKDCFASVWFHICNLYRGNKPFKAYDDTYFSQKCRAMQLECGIVDMWGPTLVVKAHGKIPKMARPFFSSK
                 KIDCAANSPLKRFLI  7.999 (219)            FKAYDDTYFSQKCRA  7.770 (259)
  301 GWSCHAFADAAPTLAKALWSVGAQITQVNAILQPSDLHQLVQISDVIWPKVKLDEKIQSYAAAKWNPFKKSTN