v1.1 03.04.09 Phosphorylation prediction results for Rift Valley fever virus

                                                                                                                  Total     Max
   Rank                                                                                                           Score     Score
 317/2881) gi|9632366|ref|NP_049343.1| NS protein [Rift Valley fever virus]                                       93.878   25.542
 562/2881) gi|9632362|ref|NP_049341.1| putative RNA-dependent RNA-polymerase [Rift Valley fever virus]           207.867   21.494
 830/2881) gi|27881464|ref|NP_777376.1| M protein [Rift Valley fever virus]                                       89.176   19.025


317/2881) score = 93.878 25.542 (total and max score)
>gi|9632366|ref|NP_049343.1| NS protein [Rift Valley fever virus]
    1 MDYFPVISVDLQSGRRVVSVEYFRGDGPPRIPYSMVGPCCVFLMHHRPSHEVRLRFSDFYNVGEFPYRVGLGDFASNVAPPPAKPFQRLIDLIGHMTLSD
      
  101 FTRFPNLKEAISWPLGEPSLAFFDLSSTRVHRNDDIRRDQIATLAMRSCKITNDLEDSFAGLHRMIATEAILRGIDLCLLPGFDLMYEVAHVQCVRLLQA
      
  201 AKEDISNAVVPNSALIVLMEESLMLRSSLPSMMGRNNWIPVIPPIPDVEMESEEESDDDGFVEVD
                                                      EMESEEESDDDGFVE 25.542 (256)
                                                  IPDVEMESEEESDDD 22.533 (252)
                                                  IPDVEMESEEESDDD 22.424 (252)
                                                      EMESEEESDDDGFVE 18.394 (256)
                                                  IPDVEMESEEESDDD  4.986 (252)


562/2881) score = 207.867 21.494 (total and max score)
>gi|9632362|ref|NP_049341.1| putative RNA-dependent RNA-polymerase [Rift Valley fever virus]
    1 MDSILSKQLVDKTGFVRVPIKHFDCTMLTLALPTFDVSKMVDRITIDFNLDDIQGASEIGSTLLPSMSIDVEDMANFVHDFTFGHLADKTDRLLMREFPM
      
  101 MNDGFDHLSPDMIIKTTSGVYNIVEFTNFRGDERGAFQAAMIKLAKYEVPCENRSQGRTVVLYVVSAYRAWCMVYLELERTLKQREMVYRYRLALSVMDE
                                             AMIKLAKYEVPCENR 10.438 (147)
  201 LRTLFPELSSTDEELGKTERELPAMVSSIQINWSVTESVFPPFSREMFDRFRSSPPDSEYITRIVSRCLINSQEKLINSSFFAEGNDKALRFSKNAEECS
        TLFPELSSTDEELGK  7.106 (210)                MFDRFRSSPPDSEYI 12.600 (254)
         LFPELSSTDEELGKT  3.653 (211)
  301 LAVERALNQYRAEDNLRDLNDHKSTIQLPPWLSYHDVDGKDLCPLQGLDVRGDHPMCNLWREVVTSANLEEIERMHDDAAAELEFAFGSKGQARERNRYH
      
  401 RVHLNMGSDVLVYIAALGVNGKKHKADTLVQQMRDRSKQPFSPDHDVITYLNFSLHALVTCGQQMRTCTALSLVIRDSVGSPEDSSAILVRKGFHEIITE
                                                                               VIRDSVGSPEDSSAI 18.718 (481)
                                                                               VIRDSVGSPEDSSAI 12.340 (481)
  501 HYKFMGSRIGHGCQMVSLIGAELSASVKQHVKPNYFVIKRLLGSGIFLLIKPTSSKSHIFVSFALSALAGPLISPLPGFSSPTKMLGILLVTDFVSYKLS
      
  601 KLTNLCKCVSLMESSFSFWAEAFGIQAGTLVGDFVPRSSDSAAMDASYMGKLSLLTLLEDKAATEELQTIARYIIMEGFVSPPEIPKPHKMTSKFPKVLR
                                                                               IIMEGFVSPPEIPKP 21.494 (681)
  701 SELQVYLLNCLCRTIQRIAGEPFILKKKDGSISWGGMFNPFSGRPLLDMQPLISCCYNGYFKNKEEETEPSSLSGMYKKIIELEHLRPQSDAFLGYKDPE
      
  801 LPRMHEFSVSYLKEACNHAKLVLRSLYGQNFMEQIDNQIIRELSGLTLERLATLKATSNFNENWYVYKDVADKNYTRDKLLVKMSKYASEGKSLAIQKFE
                                                                         KDVADKNYTRDKLLV  6.845 (875)
  901 DCMRQIESQGCMHICLFKKQQHGGLREIYVMGAEERIVQSVVETIARSIGKFFASDTLCNPPNKVKIPETHGIRARKQCKGPVWTCATSDDARKWNQGHF
      
 1001 VTKFALMLCEFTSPKWWPLIIRGCSMFTKKRMMMNLNYLKILDGHRELDIRDDFVMDLFKAYHGEAEVPWAFKGKTYLETTTGMMQGILHYTSSLLHTIH
      
 1101 QEYIRSLSFKIFNLKVAPEMSKSLVCDMMQGSDDSSMLISFPADDEKVLTRCKVAAAICFRMKKELGVYLAIYPSEKSTANTDFVMEYNSEFYFHTQHVR
      
 1201 PTIRWIAACCSLPEVETLVARQEEASNLMTSVTEGGGSFSLAAIIQQAQCTLHYMLMGMGVSELFLEYKKAVLKWNDPGLGFFLLDNPYACGLGGFRFNL
      
 1301 FKAITRTDLQKLYAFFMKKVKGSAARDWADEDVTIPETCSVSPGGALILSSSLKWGSRKKFQKLRDRLNIPENWIELINENPEVLYRAPRTGPEILLRIA
                                                                                                       RIAEKVHSPGVVSSL 18.300 (1405)
                                                                                    NENPEVLYRAPRTGP 10.789 (1386)
 1401 EKVHSPGVVSSLSSGNAVCKVMASAVYFLSATIFEDTGRPEFNFLEDSKYSLLQKMAAYSGFHGFNDMEPEDILFLFPNIEELESLDSIVYNKGEIDIIP
      
 1501 RVNIRDATQTRVTIFNEQKNLRTSPEKLVSDKWFGTQKSRIGKTTFLAEWEKLKKIVKWLEDAPEATLAHTPLNNHIQVRNFFARMESKPRTVRITGAPV
                      EQKNLRTSPEKLVSD 17.160 (1524)
                      EQKNLRTSPEKLVSD  3.994 (1524)
 1601 KKRSGVSKIAMVIRDHFSRMGHLRGVEDLAGFTRSVSAEILKHFLFCILQGPYSESYKLQLIYRVLSSVSNVEIKESDGKTKTNLIGILQRFLDGDHVVP
                                                                    YRVLSSVSNVEIKES  3.283 (1670)
 1701 IIEEMGAGTVGGFIKRQQSKVVQNKVVYYGVGIWRGFMDGYQVHLEIENDIGQPPRLRNVTTNCQSSPWDLSIPIRQWAEDMGVTNNQDYSSKSSRGARY
      
 1801 WMHSFRMQGPSKPFGCPVYIIKGDMSDVIRLRKEEVEMKVRGSTLNLYTKHHSHQDLHILSYTASDNDLSPGIFKSISDEGVAQALQLFEREPSNCWVRC
                                                                    TASDNDLSPGIFKSI 17.175 (1870)
                                          EMKVRGSTLNLYTKH 13.679 (1844)
 1901 ESVAPKFISAILEICEGKRQIKGINRTRLSEIVRICSESSLRSKVGSMFSFVANVEEAHDVDYDALMDLMIEDAKNNAFSHVVDCIELDVSGPYEMESFH
                                                             EEAHDVDYDALMDLM  9.271 (1963)  ELDVSGPYEMESFHG  7.322 (1994)
                                      VRICSESSLRSKVGS  6.992 (1940)
                                                             EEAHDVDYDALMDLM  6.705 (1963)
 2001 GRSTLTCTPSTILIRTYTFYLTLHQTMISVQAFQVILDEGVLLIALVNNYLRGSKANCWVRCESVAPKFISAILEICEGKRQIKGINRTRLSEIVEFVLN
      
 2101 LPKIKSRIYVLICRQCHGANFPPISVRRLMLEDIASVARRLIIVASFGS
      


830/2881) score = 89.176 19.025 (total and max score)
>gi|27881464|ref|NP_777376.1| M protein [Rift Valley fever virus]
    1 MYVLLTILTSVLVCEAIIRVSLSSTREETCFGDSTNPEMIEGAWDSLREEEMPEELSCSISGIREVKTSSQELYRALKAIIAADGLNNITCHGKDPEDKI
                   CEAIIRVSLSSTREE  8.561 (21)
  101 SLIKGPPHKKRVGIVRCERRRDAKQIGRKTMAGIAMTVLPALAVFALAPVVFAEDPHLRNRPGKGHNYIDGMTQEDATCKPVTYAGACSSFDVLLEKGKF
                                                                       HNYIDGMTQEDATCK 13.172 (173)
  201 PLFQSYAHHRTLLEAVHDTIIAKADPPSCDLLSAHGNPCMKEKLVMKTHCPNDYQSAHHLNNDGKMASVKCPPKYELTEDCNFCRQMTGASLKKGSYPLQ
                                                                                                         QDLFCQSSEDDGSKL  3.058 (307)
  301 DLFCQSSEDDGSKLKTKMKGVCEVGVQALKKCDGQLSTAHEVVPFAVFKNSKKVYLDKLDLKTEENLLPDSFVCFEHKGQYKGTMDSGQTKRELKSFDIS
      
  401 QCPKIGGHGSKKCTGDAAFCSAYECTAQYANAYCSHANGSGIVQIQVSGVWKKPLCVGYERVVVKRELSAKPIQRVEPCTTCITKCEPHGLVVRSTGFKI
      
  501 SSAVACASGVCVTGSQSPSTEITLKYPGISQSSGGDIGVHMAHDDQSVSSKIVAHCPPQDPCLVHDCIVCAHGLINYQCHTALSAFVVVFVFSSIAIICL
             SGVCVTGSQSPSTEI 19.025 (515)
  601 AILYRVLKCLKIAPRKVLNPLMWITAFIRWIYKKMVARVADNINQVNREIGWMEGGQLVLGNPAPIPRHAPIPRYSTYLMLLLIVSYASACSELIQASSR
      
  701 ITTCSTEGVNTKCRLSGTALIRAGSVGAEACLMLKGVKEDQTKFLKLKTVSSELSCREGQSYWTGSFSPKCLSSRRCHLVGECHVNRCLSWRDNETSAEF
                                                                  SYWTGSFSPKCLSSR 12.635 (768)
  801 SFVGESTTMRENKCFEQCGGWGCGCFNVNPSCLFVHTYLQSVRKEALRVFNCIDWVHKLTLEITDFDGSVSTIDLGASSSRFTNWGSVSLSLDAEGISGS
                                                                                                  DAEGISGSNSFSFIE 15.078 (900)
                                                                                                      ISGSNSFSFIESPGK 12.735 (904)
  901 NSFSFIESPGKGYAIVDEPFSEIPRQGFLGEIRCNSESSVLSAHESCLRAPNLISYKPMIDQLECTTNLIDPFVVFERGSLPQTRNDKTFAASKGNRGVQ
                                     IRCNSESSVLSAHES  4.913 (939)
 1001 AFSKGSVQADLTLMFDNFEVDFVGAAVSCDAAFLNLTGCYSCNAGARVCLSITSTGTGSLSAHNKDGSLHIVLPSENGTKDQCQILHFTVPEVEEEFMYS
      
 1101 CDGDERPLLVKGTLIAIDPFDDRREAGGESTVVNPKSGSWNFFDWFSGLMSWFGGPLKTILLICLYVALSIGLFFLLIYLGGTGLSKMWLAATKKAS