v1.1 03.04.09 Phosphorylation prediction results for Nipah virus

                                                                                                                  Total     Max
   Rank                                                                                                           Score     Score
 532/2881) gi|13559809|ref|NP_112021.1| nucleocapsid protein [Nipah virus]                                        41.001   21.993
 692/2881) gi|13559811|ref|NP_112025.1| matrix protein [Nipah virus]                                              63.594   20.259
1084/2881) gi|13559812|ref|NP_112024.1| C protein [Nipah virus]                                                   17.222   17.222
1415/2881) gi|13559815|ref|NP_112028.1| polymerase [Nipah virus]                                                 150.774   15.247
1505/2881) gi|13559810|ref|NP_112022.1| phosphoprotein [Nipah virus]                                             137.439   14.801
1506/2881) gi|13559816|ref|NP_112023.1| V protein [Nipah virus]                                                  112.471   14.801
1980/2881) gi|13559813|ref|NP_112026.1| fusion protein [Nipah virus]                                              12.594   12.594
2178/2881) gi|13559814|ref|NP_112027.1| attachment glycoprotein [Nipah virus]                                     17.298   10.466


532/2881) score = 41.001 21.993 (total and max score)
>gi|13559809|ref|NP_112021.1| nucleocapsid protein [Nipah virus]
    1 MSDIFEEAASFRSYQSKLGRDGRASAATATLTTKIRIFVPATNSPELRWELTLFALDVIRSPSAAESMKVGAAFTLISMYSERPGALIRSLLNDPDIEAV
      
  101 IIDVGSMVNGIPVMERRGDKAQEEMEGLMRILKTARDSSKGKTPFVDSRAYGLRITDMSTLVSAVITIEAQIWILIAKAVTAPDTAEESETRRWAKYVQQ
      
  201 KRVNPFFALTQQWLTEMRNLLSQSLSVRKFMVEILIEVKKGGSAKGRAVEIISDIGNYVEETGMAGFFATIRFGLETRYPALALNEFQSDLNTIKSLMLL
      
  301 YREIGPRAPYMVLLEESIQTKFAPGGYPLLWSFAMGVATTIDRSMGALNINRGYLEPMYFRLGQKSARHHAGGIDQNMANRLGLSSDQVAELAAAVQETS
                                                         RGYLEPMYFRLGQKS 13.013 (359)
  401 AGRQESNVQAREAKFAAGGVLIGGSDQDIDEGEEPIEQSGRQSVTFKREMSISSLANSVPSSSVSTSGGTRLTNSLLNLRSRLAAKAAKEAASSNATDDP
                                                 VTFKREMSISSLANS 21.993 (451)
                       GGVLIGGSDQDIDEG  2.819 (425) KREMSISSLANSVPS  3.175 (454)
  501 AISNRTQGESEKKNNQDLKPAQNDLDFVRADV
      


692/2881) score = 63.594 20.259 (total and max score)
>gi|13559811|ref|NP_112025.1| matrix protein [Nipah virus]
    1 MEPDIKSISSESMEGVSDFSPSSWEHGGYLDKVEPEIDENGSMIPKYKIYTPGANERKYNNYMYLICYGFVEDVERTPETGKRKKIRTIAAYPLGVGKSA
       EPDIKSISSESMEGV 14.355 (9)                                          FVEDVERTPETGKRK 20.259 (77)
                                                 IPKYKIYTPGANERK 16.702 (51)
  101 SHPQDLLEELCSLKVTVRRTAGSTEKIVFGSSGPLNHLVPWKKVLTSGSIFNAVKVCRNVDQIQLDKHQALRIFFLSITKLNDSGIYMIPRTMLEFRRNN
                                                                                     KLNDSGIYMIPRTML 12.277 (187)
  201 AIAFNLLVYLKIDADLSKMGIQGSLDKDGFKVASFMLHLGNFVRRAGKYYSVDYCRRKIDRMKLQFSLGSIGGLSLHIKINGVISKRLFAQMGFQKNLCF
      
  301 SLMDINPWLNRLTWNNSCEISRVAAVLQPSIPREFMIYDDVFIDNTGRILKG
      


1084/2881) score = 17.222 17.222 (total and max score)
>gi|13559812|ref|NP_112024.1| C protein [Nipah virus]
    1 MMASILLTLFRRTKKKYRRHTDDQVFNNPASKIKQKPGKIFCSAPVENLNKLRGECLRMMEMLKEETWRIYPVLLPQMELLERECRTPVTGQKVQMTYNW
                   KKKYRRHTDDQVFNN 17.222 (21)
  101 TQWLQTLYTMIMEENVPDMDLLQALREGGVITHQEQTMGMYVLYLMQRCCPMLPKLQFLKKIGKLI
      


1415/2881) score = 150.774 15.247 (total and max score)
>gi|13559815|ref|NP_112028.1| polymerase [Nipah virus]
    1 MADELSISDIIYPECHLDSPIVSGKLISAIEYAQLRHNQPSDDKRLSENIRLNLHGKRKSLYILRQSKQGDYIRNNIKNLKEFMHIAYPECNNILFSITS
                                                                      RQSKQGDYIRNNIKN 13.150 (72)
                                                                      RQSKQGDYIRNNIKN  7.346 (72)
  101 QGMTSKLDNIMKKSFKAYNIISKKVIGMLQNITRNLITQDRRDEIINIHECRRLGDLGKNMSQSKWYECFLFWFTIKTEMRAVIKNSQKPKFRSDSCIIH
                                                            GDLGKNMSQSKWYEC 12.639 (162)
  201 MRDKSTEIILNPNLICIFKSDKTGKKCYYLTPEMVLMYCDVLEGRMMMETTVKSDIKYQPLISRSNALWGLIDPLFPVMGNRIYNIVSMIEPLVLALLQL
      
  301 KDEARILRGAFLHHCIKEMHQELSECGFTDQKIRSMFIDDLLSILNIDNIHLLAEFFSFFRTFGHPILEAKVAAEKVREHMLADKVLEYAPIMKAHAIFC
      
  401 GTIINGYRDRHGGAWPPLYLPAHASKHIIRLKNSGESLTIDDCVKNWESFCGIQFDCFMELKLDSDLSMYMKDKALSPIKDEWDSVYPREVLSYTPPKST
                                                                           YMKDKALSPIKDEWD  9.639 (477)
                                                                                             PREVLSYTPPKSTEP  4.781 (495)
  501 EPRRLVDVFVNDENFDPYNMLEYVLSGAYLEDEQFNVSYSLKEKETKQAGRLFAKMTYKMRACQVIAEALIASGVGKYFKENGMVKDEHELLKTLFQLSI
      
  601 SSVPRGNSQGNDPQSINNIERDFQYFKGVTTNVKDKKNNSFNKVKSALNNPCQADGVHHNMSPNTRNRYKCSNTSKSFLDYHTEFNPHNHYKSDNTEAAV
      SSVPRGNSQGNDPQS  7.949 (608)
  701 LSRYEDNTGTKFDTVSAFLTTDLKKFCLNWRYESMAIFAERLDEIYGLPGFFNWMHKRLERSVIYVADPNCPPNIDKHMELEKTPEDDIFIHYPKGGIEG
      
  801 YSQKTWTIATIPFLFLSAYETNTRIAAIVQGDNESIAITQKVHPNLPYKVKKEICAKQAQLYFERLRMNLRALGHNLKATETIISTHLFIYSKKIHYDGA
      
  901 VLSQALKSMSRCCFWSETLVDETRSACSNISTTIAKAIENGLSRNVGYCINILKVIQQLLISTEFSINETLTLDVTSPISNNLDWLITAALIPAPIGGFN
      
 1001 YLNLSRIFVRNIGDPVTASLADLKRMIDHSIMTESVLQKVMNQEPGDASFLDWASDPYSGNLPDSQSITKTIKNITARTILRNSPNPMLKGLFHDKSFDE
                                                               YSGNLPDSQSITKTI 15.247 (1065)   KGLFHDKSFDEDLEL  6.160 (1097)
 1101 DLELASFLMDRRVILPRAAHEILDNSLTGAREEIAGLLDTTKGLIRSGLRKSGLQPKLVSRLSHHDYNQFLILNKLLSNRRQNDLISSNTCSVDLARALR
      
 1201 SHMWRELALGRVIYGLEVPDALEAMVGRYITGSLECQICEQGNTMYGWFFVPRDSQLDQVDREHSSIRVPYVGSSTDERSDIKLGNVKRPTKALRSAIRI
      
 1301 ATVYTWAYGDNEECWYEAWYLASQRVNIDLDVLKAITPVSTSNNLSHRLRDKSTQFKFAGSVLNRVSRYVNISNDNLDFRIEGEKVDTNLIYQQAMLLGL
              GDNEECWYEAWYLAS 10.528 (1316)
 1401 SVLEGKFRLRLETDDYNGIYHLHVKDNCCVKEVADVGQVDAELPIPEYTEVDNNHLIYDPDPVSEIDCSRLSNQESKSRELDFPLWSTEELHDVLAKTVA
                  TDDYNGIYHLHVKDN  8.787 (1420)
           KFRLRLETDDYNGIY  4.169 (1413)
 1501 QTVLEIITKADKDVLKQHLAIDSDDNINSLITEFLIVDPELFALYLGQSISIKWAFEIHHRRPRGRHTMVDLLSDLVSNTSKHTYKVLSNALSHPRVFKR
                     KQHLAIDSDDNINSL  2.237 (1523)
 1601 FVNCGLLLPTQGPYLHQQDFEKLSQNLLVTSYMIYLMNWCDFKKSPFLIAEQDETVISLREDIITSKHLCVIIDLYANHHKPPWIIDLNPQEKICVLRDF
      
 1701 ISKSRHVDTSSRSWNTSDLDFVIFYASLTYLRRGIIKQLRIRQVTEVIDTTTMLRDNIIVENPPIKTGVLDIRGCIIYNLEEILSMNTKSASKKIFNLNS
           HVDTSSRSWNTSDLD 13.030 (1713)
 1801 RPSVENHKYRRIGLNSSSCYKALNLSPLIQRYLPSGAQRLFIGEGSGSMMLLYQSTLGQSISFYNSGIDGDYIPGQRELKLFPSEYSIAEEDPSLTGKLK
                                                                                  RELKLFPSEYSIAEE 13.683 (1884)
                                                                                     KLFPSEYSIAEEDPS  6.649 (1887)
 1901 GLVVPLFNGRPETTWIGNLDSYEYIINRTAGRSIGLVHSDMESGIDKNVEEILVEHSHLISIAINVMMEDGLLVSKIAYTPGFPISRLFNMYRSYFGLVL
                                     RSIGLVHSDMESGID  2.503 (1939)
 2001 VCFPVYSNPDSTEVYLLCLQKTVKTIVPPQKVLEHSNLHDEVNDQGITSVIFKIKNSQSKQFHDDLKKYYQIDQPFFVPTKITSDEQVLLQAGLKLNGPE
      
 2101 ILKSEISYDIGSDINTLRDTIIIMLNEAMNYFDDNRSPSHHLEPYPVLERTRIKTIMNCVTKKVIVYSLIKFKDTKSSELYHIKNNIRRKVLILDFRSKL
                                   NYFDDNRSPSHHLEP 12.278 (2137)
 2201 MTKTLPKGMQERREKNGFKEVWIVDLSNREVKIWWKIIGYISII
      


1505/2881) score = 137.439 14.801 (total and max score)
>gi|13559810|ref|NP_112022.1| phosphoprotein [Nipah virus]
    1 MDKLELVNDGLNIIDFIQKNQKEIQKTYGRSSIQQPSIKDQTKAWEDFLQCTSGESEQVEGGMSKDDGDVERRNLEDLSSTSPTDGTIGKRVSNTRDWAE
                                                   EDFLQCTSGESEQVE  3.014 (53)
  101 GSDDIQLDPVVTDVVYHDHGGECTGYGFTSSPERGWSDYTSGANNGNVCLVSDAKMLSYAPEIAVSKEDRETDLVHLENKLSTTGLNPTAVPFTLRNLSD
                             TGYGFTSSPERGWSD  4.306 (131)                                        PFTLRNLSDPAKDSP 14.104 (199)
  201 PAKDSPVIAEHYYGLGVKEQNVGPQTSRNVNLDSIKLYTSDDEEADQLEFEDEFAGSSSEVIVGISPEDEEPSSVGGKPNESIGRTIEGQSIRDNLQAKD
                                     LDSIKLYTSDDEEAD 13.640 (239)
                                                                SEVIVGISPEDEEPS 12.927 (266)
                                      DSIKLYTSDDEEADQ  9.149 (240)
                                                                SEVIVGISPEDEEPS  6.528 (266)
                                      DSIKLYTSDDEEADQ  3.977 (240)
                                      DSIKLYTSDDEEADQ  3.675 (240)
                                      DSIKLYTSDDEEADQ  2.931 (240)
  301 NKSTDVPGAGPKDSAVKEEPPQKRLPMLAEEFECSGSEDPIIRELLKENSLINCQQGKDAQPPYHWSIERSISPDKTEIVNGAVQTADRQRPGTPMPKSR
                                                                     YHWSIERSISPDKTE 14.801 (371)
                                                                                            ADRQRPGTPMPKSRG 14.627 (394)
                                                                       WSIERSISPDKTEIV  5.791 (373)
                                                                       WSIERSISPDKTEIV  3.002 (373)
  401 GIPIKKGTDAKYPSAGTENVPGSKSGATRHVRGSPPYQEGKSVNAENVQLNASTAVKETDKSEVNPVDDNDSLDDKYIMPSDDFSNTFFPHDTDRLNYHA
                                ATRHVRGSPPYQEGK 12.729 (434)               NDSLDDKYIMPSDDF  7.084 (477)
                                                                      NPVDDNDSLDDKYIM  5.156 (472)
  501 DHLGDYDLETLCEESVLMGVINSIKLINLDMRLNHIEEQVKEIPKIINKLESIDRVLAKTNTALSTIEGHLVSMMIMIPGKGKGERKGKNNPELKPVIGR
      
  601 DILEQQSLFSFDNVKNFRDGSLTNEPYGAAVQLREDLILPELNFEETNASQFVPMADDSSRDVIKTLIRTHIKDRELRSELIGYLNKAENDEEIQEIANT
      
  701 VNDIIDGNI
      


1506/2881) score = 112.471 14.801 (total and max score)
>gi|13559816|ref|NP_112023.1| V protein [Nipah virus]
    1 MDKLELVNDGLNIIDFIQKNQKEIQKTYGRSSIQQPSIKDQTKAWEDFLQCTSGESEQVEGGMSKDDGDVERRNLEDLSSTSPTDGTIGKRVSNTRDWAE
                                                   EDFLQCTSGESEQVE  3.014 (53)
  101 GSDDIQLDPVVTDVVYHDHGGECTGYGFTSSPERGWSDYTSGANNGNVCLVSDAKMLSYAPEIAVSKEDRETDLVHLENKLSTTGLNPTAVPFTLRNLSD
                             TGYGFTSSPERGWSD  4.306 (131)                                        PFTLRNLSDPAKDSP 14.104 (199)
  201 PAKDSPVIAEHYYGLGVKEQNVGPQTSRNVNLDSIKLYTSDDEEADQLEFEDEFAGSSSEVIVGISPEDEEPSSVGGKPNESIGRTIEGQSIRDNLQAKD
                                     LDSIKLYTSDDEEAD 13.640 (239)
                                                                SEVIVGISPEDEEPS 12.927 (266)
                                      DSIKLYTSDDEEADQ  9.149 (240)
                                                                SEVIVGISPEDEEPS  6.528 (266)
                                      DSIKLYTSDDEEADQ  3.977 (240)
                                      DSIKLYTSDDEEADQ  3.675 (240)
                                      DSIKLYTSDDEEADQ  2.931 (240)
  301 NKSTDVPGAGPKDSAVKEEPPQKRLPMLAEEFECSGSEDPIIRELLKENSLINCQQGKDAQPPYHWSIERSISPDKTEIVNGAVQTADRQRPGTPMPKSR
                                                                     YHWSIERSISPDKTE 14.801 (371)
                                                                                            ADRQRPGTPMPKSRG 14.627 (394)
                                                                       WSIERSISPDKTEIV  5.791 (373)
                                                                       WSIERSISPDKTEIV  3.002 (373)
  401 GIPIKKGHRREISICWDGKRAWVEEWCNPACSRITPLPRRQECQCGECPTECFHCG
      


1980/2881) score = 12.594 12.594 (total and max score)
>gi|13559813|ref|NP_112026.1| fusion protein [Nipah virus]
    1 MVVILDKRCYCNLLILILMISECSVGILHYEKLSKIGLVKGVTRKYKIKSNPLTKDIVIKMIPNVSNMSQCTGSVMENYKTRLNGILTPIKGALEIYKNN
      
  101 THDLVGDVRLAGVIMAGVAIGIATAAQITAGVALYEAMKNADNINKLKSSIESTNEAVVKLQETAEKTVYVLTALQDYINTNLVPTIDKISCKQTELSLD
      
  201 LALSKYLSDLLFVFGPNLQDPVSNSMTIQAISQAFGGNYETLLRTLGYATEDFDDLLESDSITGQIIYVDLSSYYIIVRVYFPILTEIQQAYIQELLPVS
      
  301 FNNDNSEWISIVPNFILVRNTLISNIEIGFCLITKRSVICNQDYATPMTNNMRECLTGSTEKCPRELVVSSHVPRFALSNGVLFANCISVTCQCQTTGRA
      
  401 ISQSGEQTLLMIDNTTCPTAVLGNVIISLGKYLGSVNYNSEGIAIGPPVFTDKVDISSQISSMNQSLQQSKDYIKEAQRLLDTVNPSLISMLSMIILYVL
                                                        TDKVDISSQISSMNQ 12.594 (458)
  501 SIASLCIGLITFISFIIVEKKRNTYSRLEDRRVRPTSSGDLYYIGT
      


2178/2881) score = 17.298 10.466 (total and max score)
>gi|13559814|ref|NP_112027.1| attachment glycoprotein [Nipah virus]
    1 MPAENKKVRFENTTSDKGKIPSKVIKSYYGTMDIKKINEGLLDSKILSAFNTVIALLGSIVIIVMNIMIIQNYTRSTDNQAVIKDALQGIQQQIKGLADK
      
  101 IGTEIGPKVSLIDTSSTITIPANIGLLGSKISQSTASINENVNEKCKFTLPPLKIHECNISCPNPLPFREYRPQTEGVSNLVGLPNNICLQKTSNQILKP
      
  201 KLISYTLPVVGQSGTCITDPLLAMDEGYFAYSHLERIGSCSRGVSKQRIIGVGEVLDRGDEVPSLFMTNVWTPPNPNTVYHCSAVYNNEFYYVLCAVSTV
                                                                                         AVYNNEFYYVLCAVS  6.832 (291)
  301 GDPILNSTYWSGSLMMTRLAVKPKSNGGGYNQHQLALRSIEKGRYDKVMPYGPSGIKQGDTLYFPAVGFLVRTEFKYNDSNCPITKCQYSKPENCRLSMG
      
  401 IRPNSHYILRSGLLKYNLSDGENPKVVFIEISDQRLSIGSPSKIYDSLGQPVFYQASFSWDTMIKFGDVLTVNPLVVNWRNNTVISRPGQSQCPRFNTCP
      
  501 EICWEGVYNDAFLIDRINWISAGVFLDSNQTAENPVFTVFKDNEILYRAQLASEDTNAQKTITNCFLLKNKIWCISLVEIYDTGDNVIRPKLFAVKIPEQ
      EICWEGVYNDAFLID 10.466 (508)
  601 CT