v1.1 03.04.09 Phosphorylation prediction results for Merkel cell polyomavirus

                                                                                                                  Total     Max
   Rank                                                                                                           Score     Score
 277/2881) gi|165974000|ref|YP_001651046.1| truncated large T antigen [Merkel cell polyomavirus]                 388.636   26.626
 961/2881) gi|165974002|ref|YP_001651048.1| VP1 [Merkel cell polyomavirus]                                        61.343   18.051
2433/2881) gi|165974001|ref|YP_001651047.1| small T antigen [Merkel cell polyomavirus]                             8.220    8.220


277/2881) score = 388.636 26.626 (total and max score)
>gi|165974000|ref|YP_001651046.1| truncated large T antigen [Merkel cell polyomavirus]
    1 MDLVLNRKEREALCKLLEIAPNCYGNIPLMKAAFKRSCLKHHPDKGGNPVIMMELNTLWSKFQQNIHKLRSDFSMFDEVDEAPIYGTTKFKEWWRSGGFS
                                                                                              KFKEWWRSGGFSFGK 12.350 (96)
                                                                                   EVDEAPIYGTTKFKE 11.825 (85)
  101 FGKAYEYGPNPHGANSRSRKPSSNASRGAPSGSSPPHSQSSSSGYGSFSASQASDSQSRGPDIPPEHHEEPTSSSGSSSREETTNSGRESSTPNGTSVPR
                PHGANSRSRKPSSNA 14.973 (118)          SASQASDSQSRGPDI 26.626 (156)
                                    SGSSPPHSQSSSSGY 23.411 (138)         HEEPTSSSGSSSREE 25.630 (175)
                                RGAPSGSSPPHSQSS 18.511 (134)             HEEPTSSSGSSSREE 21.425 (175)
                                         PHSQSSSSGYGSFSA 13.743 (143)  EHHEEPTSSSGSSSR 19.422 (173)
                    NSRSRKPSSNASRGA 12.303 (122) GYGSFSASQASDSQS 18.849 (151)
                                                                           EPTSSSGSSSREETT 16.816 (177)
                                                                         HEEPTSSSGSSSREE 11.478 (175)
                                                                            PTSSSGSSSREETTN  3.739 (178)
  201 NSSRTYGTWEDLFCDESLSSPEPPSSSEEPEEPPSSRSSPRQPPCSSAEEASSSQFTD
                       LSSPEPPSSSEEPEE 22.322 (225)
                  FCDESLSSPEPPSSS 17.136 (220)
                                 EEPEEPPSSRSSPRQ 15.688 (235)
                                     EPPSSRSSPRQPPCS 14.052 (239)
                        SSPEPPSSSEEPEEP 13.018 (226)
                 LFCDESLSSPEPPSS 12.361 (219)
                        SSPEPPSSSEEPEEP 11.628 (226)
                       LSSPEPPSSSEEPEE 11.114 (225)
                         SPEPPSSSEEPEEPP 10.507 (227)
                                            SPRQPPCSSAEEASS  5.512 (246)
                                             PRQPPCSSAEEASSS  4.197 (247)


961/2881) score = 61.343 18.051 (total and max score)
>gi|165974002|ref|YP_001651048.1| VP1 [Merkel cell polyomavirus]
    1 MAPKRKASSTCKTPKRQCIPKPGCCPNVASVPKLLVKGGVEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPA
      MAPKRKASSTCKTPK 18.051 (8)                                 NPRMGVNSPDLPTTS 12.873 (67)
       APKRKASSTCKTPKR 16.675 (9)
  101 YSVARVSLPMLNEDITCDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTEYPKTTNGGPITIETV
      
  201 LGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCAHIVGFLFKTSGKM
      
  301 ALHGLPRYFNVTLRKIWVKNPYPVVNLINSLFSNLMPKVSGQPMEGKDNQVEEVRIYEGSEQLPGNPDIVRFLDKFGQEKTVYPKPSVAPAAVTFQSNQQ
      
  401 DKGKAPLKGPQKASQKESQTQQL
            LKGPQKASQKESQTQ 13.744 (414)


2433/2881) score =  8.220  8.220 (total and max score)
>gi|165974001|ref|YP_001651047.1| small T antigen [Merkel cell polyomavirus]
    1 MDLVLNRKEREALCKLLEIAPNCYGNIPLMKAAFKRSCLKHHPDKGGNPVIMMELNTLWSKFQQNIHKLRSDFSMFDEVSTKFPWEEYGTLKDYMQSGYN
      
  101 ARFCRGPGCMLKQLRDSKCACISCKLSRQHCSLKTLKQKNCLTWGECFCYQCFILWFGFPPTWESFDWWQKTLEETDYCLLHLHLF
                                                                            KTLEETDYCLLHLHL  8.220 (178)