v1.1 03.04.09 Phosphorylation prediction results for J-virus

                                                                                                                  Total     Max
   Rank                                                                                                           Score     Score
 578/2881) gi|77124347|ref|YP_338084.1| attachment glycoprotein [J-virus]                                         36.532   21.336
 656/2881) gi|77124338|ref|YP_338075.1| nucleocapsid protein [J-virus]                                            89.112   20.577
 845/2881) gi|77124342|ref|YP_338079.1| C protein [J-virus]                                                       53.512   18.874
 868/2881) gi|77124348|ref|YP_338085.1| large protein [J-virus]                                                   82.995   18.748
1021/2881) gi|77124339|ref|YP_338076.1| phosphoprotein [J-virus]                                                  17.622   17.622
2299/2881) gi|77124344|ref|YP_338081.1| fusion protein [J-virus]                                                  18.513    9.275
2446/2881) gi|77124345|ref|YP_338082.1| small hydrophobic protein [J-virus]                                        8.080    8.080
2681/2881) gi|77124346|ref|YP_338083.1| transmembrane protein [J-virus]                                            5.466    5.466


578/2881) score = 36.532 21.336 (total and max score)
>gi|77124347|ref|YP_338084.1| attachment glycoprotein [J-virus]
    1 MNPVAMSNFYGINQADHLREKGDQPEKGPSVLTYVSLITGLLSLFTIIALNVTNIIYLTGSGGTMATIKDNQQSMSGSMRDISGMLVEDLKPKTDLINSM
                                                                        TIKDNQQSMSGSMRD 21.336 (74)
  101 VSYTIPSQISAMSAMIKNEVLRQCTPSFMFNNTICPIAEHPVHTSYFEEVGIEAISMCTGTNRKLVVNQGINFVEYPSFIPGSTKPGGCVRLPSFSLGLE
      
  201 VFAYAHAITQDDCTSSSTPDYYFSVGRIADHGTDVPVFETLAEWFLDDKMNRRSCSVTAAGKGGWLGCSILVGSFTDELTSPEVNRISLSYMDTFGKKKD
                   TSSSTPDYYFSVGRI 10.729 (221)     DDKMNRRSCSVTAAG  4.467 (254)
  301 WLYTGSEVRADQSWSALFFSVGSGVVIGDTVYFLVWGGLNHPINVDAMCRAPGCQSPTQSLCNYAIKPQEWGGNQIVNGILHFKHDTNEKPTLHVRTLSP
      
  401 DNNWMGAEGRLFHFHNSGKTFIYTRSSTWHTLPQVGILTLGWPLSVQWVDITSISRPGQSPCEYDNRCPHQCVTGVYTDLFPLGVSYEYSVTAYLDQVQS
      
  501 RMNPKIALVGAQEKIYEKTITTNTQHADYTTTSCFAYKLRVWCVSIVEMSPGVITTRQPVPFLYHLNLGCQDTSTGSLTPLDAHGGTYLNTDPVGNKVDC
      
  601 YFVLHEGQIYFGMSVGPINYTYSIVGRSREIGANMNVSLNQLCHSVYTEFLKEKEHPGTRNNIDVEGWLLKRIETLNGTKIFGLDDLEGSGPGHQSGPED
      
  701 PSIAPIGHN
      


656/2881) score = 89.112 20.577 (total and max score)
>gi|77124338|ref|YP_338075.1| nucleocapsid protein [J-virus]
    1 MSKLNKVLDEFRDFKNNPPKKVGPVTALQGFKKNVVVPVPMMKDTVKRFHFITFCLQLVWSDLSSGAFITGAFLALLSIFAENPAAMLRSLLNDPDIDVQ
      
  101 LAEIADIDNDKLKLATRGKEMSRYENDMMRMASAGPSKGASPYPYVRQEYQELCPKSTEELQLCVQSITTQLWILLTKAVTAIDTARDSEKKRWGKFLQQ
                                       AGPSKGASPYPYVRQ 16.437 (141)
                      RGKEMSRYENDMMRM  7.875 (124)
  201 RRALEEYQLVDAWLDRARVRVASDLAIRRYMITILLETGKMTGPKPRVVELIADIGNYISETGMAGFFLTIKYGIETKYPVLAMSEFAADLATVLSLMKM
      
  301 YTTLGEKAPYMVILEESIQTKFAPGNYPILWSYAMGVASVLDRSVSNLNYTRPYLENAFFRLGESMVQNMGFTVNKAVAEDLGFSEEQVAAVREILKSEN
      
  401 ANMSNGPQGPKANQSSTKSLDIKNADSIIPESDDETDAPEDVKARLDAEKEASRKKREASMRKRQSKQDKSRADSTIRDIEDELNDIISKTKNLSSKPKG
                              ADSIIPESDDETDAP  7.584 (432)           RQSKQDKSRADSTIR 20.577 (471)        GSSNTTDTPKQSDEM 13.280 (507)
                                                          SRKKREASMRKRQSK  4.934 (460)
                                                                         QDKSRADSTIRDIED  4.599 (475)
  501 SSNTTDTPKQSDEMSDLSAING
             PKQSDEMSDLSAING 13.825 (515)


845/2881) score = 53.512 18.874 (total and max score)
>gi|77124342|ref|YP_338079.1| C protein [J-virus]
    1 MESKLPNFFRRIRRTFRRRTGEVQLDYQPPKKESQPGKPLQRLPMESRSSWVEETEKIREENKLKAKTILVAMDMVEKRYPPAQILQLYSCRDLITKYGM
                                YQPPKKESQPGKPLQ 12.270 (34)
                  RRTFRRRTGEVQLDY 12.254 (20)   LPMESRSSWVEETEK  5.117 (50)
                                             LQRLPMESRSSWVEE  4.997 (47)
  101 VRMLLLIVAEKGEIPGINMGGLIQARLLTQEEVTNLMEAVPIVRLMLETLGK
                           LIQARLLTQEEVTNL 18.874 (129)


868/2881) score = 82.995 18.748 (total and max score)
>gi|77124348|ref|YP_338085.1| large protein [J-virus]
    1 MSLLTMDSNISITDILYPECHLDSPIVTGKLYSLLCRGGFPHREHLDDKTLDINYRVNQSYIKRLPITVDQQKLKQCLNEKYKNMEKLNPIPYPFANKYL
      
  101 FRINDLEFISDIASTFSLANTCYKKISNRLVKLKSHTLAKLGMKTTVDQQSEIHEEKSIKSLPTIMEGTIWYQPFLFWFKCKFIMRSLIKRHTRLRHNAY
      
  201 HTESVFDTQNHFVACNKHLLLIVRKSDLQIYYFTFEMVLMFCDVVEGRLMIETGMRSDWRYSEFLIRGSKLWELMDCMFEDLGNDTYNIVAMIEPLVLGY
      
  301 LQLKDESSLLKGAFLDFCFNEVISELESHGYTDKRDIKFVLDYISDIFQCDDIHMISEFFSFFRTFGHPTLEAEEAANKVRAHMNKPKVISFEIMMKGHA
      
  401 LFCGIIINGFRDRHGGAWPPHTFPDHVDKPVREASMNSEALTHELCIQNWKSFVGFKFKCFMPLTLDEDLTMYMKDKALAAIKPEWDSVYPRENLPYPPP
      
  501 KQTTSRRLVEVFLKDTSFDPVNLINYVLSGDYLKDNDFNLSYSLKEKEIKKVGRLFAKMTYKMRACQVIGESLIATGVGKYFKENGMVKDEHELLKTLHK
      
  601 LSVSSVSKNNKVGLKTERYDNKSETRKTRGKNNSRNIIKCKSCKSSVNKSYSRRETCENKDLNDVQYETMSTFLTTDLQKFCLNWRQETTNIFAQRLDEI
                                                                 KDLNDVQYETMSTFL 11.765 (667)
  701 YGLPGFFSWLHKRLEISTLYVADPHCPPYNSCKIKLDDTENKQIFIKYPMGGIEGYCQKMWTIITIPLLFLSAYECGAKIAAVVQGDNQAIAITKRVHPN
      
  801 LPYKQKKYLCSKLAQEYFNRLRINMGGIGHNLKANETIVSSHFFIYSKRIYYDGQVLSQALKPLSRCVFWSETIVDETRSACSNICTAVAKSIEQGFSRW
      
  901 VGYSIAVLKTLQQLVISLKFTINESMTRDIAEPILKNPNWMIAAALIPSQLGGFNYINISRLYIRNIGDPVTASIADLKRMISVGLMDERVLQKVMHQEP
                                                                                 ADLKRMISVGLMDER 18.748 (983)
 1001 GDCNFLDWASEPYSINIPSSQSVTIMLKNITARMILKGSANPMLKGLFHDDFDQEDRDLAKFLMDRAIIIPRAAHEIMDKSLTGARQEIAGMLDSTKGLI
      
 1101 RNGLIAGGLRPRLVERLSQYDYEQFRVFNALMSIKTTSSLINWDACAVELARRLRNTMWVHLTHGRPIYGLEVPDTIEAMNGFLIESCSDCYYCQANNTE
      
 1201 YCWFFVPINCELDQVAHESNNIRVPYFGSTTEERSEIKLSSVRSASRALKAAIRIATVYTWAYGDSDERWEEAWYLASFRARLTIDELKAITPISTSNNI
                                                                         ERWEEAWYLASFRAR 10.954 (1275)
 1301 AHRLRDKSTQMKYSGSSLNRVSRYTMISNDNLNFVKEGNKIDTNLIYQQVMLLGLASLEDLFRFSQTTGSENTVYHLHVEQNCCVIEMEDHPYVSSDDVL
      
 1401 PTLRGVYDNRLIYDETPLLDKEVETIHTQMYRSNVLDFPRYSIKELNTLLSQSLACTIIDIITKDTKDHLTEFKVLANDDDINSLITEFLLVDPSEFSVH
      
 1501 LGMVIAINWSYDVYYRRPHGKYQMSEYLSTYLRVTSRSFLSVLSNALSHPRVFRRFWDVGLVEPIYGSNINTQNYTMVAIDLLTRSYENYLDLWLDGEEL
                                                                VGLVEPIYGSNINTQ 10.645 (1566)       LDGEELEYILPESNE 14.660 (1602)
                                                                                                         LEYILPESNEEYVDQ  5.422 (1607)
 1601 EYILPESNEEYVDQRYELVQSKHLCCLCCLYLDREEMPRILGMTSIEKCSILTDSLNRFKYTKPGFYTWNLSPLSVCVYPVSLTYIRRGTIKHIRLRCAI
              EEYVDQRYELVQSKH 10.801 (1616)
 1701 QFSDPITENAKFDPLNQKSFVITRNIENGLLTSFKAFDCVLLLSSDFRKFNNLEPSLPTHNRWESHVTRRVGLNSTSCYKAAEVGLYILNKISLSGDRLF
      
 1801 LGEGSGAMLTFYYMLFGAAKCYYNTGVLNTGLVGQRVFQVFPSEVLIVSHNNPNDLDLEKNIKVLFNGKPECSWIGDMECFAYIMNSIPLNSLSLIHNDT
      
 1901 ESSLEKTPEVILNEQIHSLCLALNLGDNNSIYVVKLAPRDNDYSSTLISLFYQYYSNVICLLPSYSNPASPECYIICTEKKHHSLIYPALVVNSLNIISN
      
 2001 STNTTINHNIMDMKFNMRKEIVANRKWYGDYLDSDLTTLDEVEKLMLSYGFQINGPKLIKQIIGHDVASGEINFKSYVNSTLNNIVNHCDPDRSTSAFLE
      
 2101 PYPLLKDSKLRELMDMLGFKLCVYILLYMKVHNQSYRRNLINDIRRKYLRVDLKSDEIKCVLQEYLLRKLKKFGVNMRWHYNLSTPEVKIWWKIVGYSVL
      
 2201 YSED
      


1021/2881) score = 17.622 17.622 (total and max score)
>gi|77124339|ref|YP_338076.1| phosphoprotein [J-virus]
    1 MNSYSVQALEQLVNDGIKTAQFFQKNQENIQKTYGRSAIGLPTTKERISAWEAVAETPYGEQIQLGGGNGEDQRGEQAEGQDNPGGHGHGGEEIPTGANP
      
  101 SALQLQGSYNQVWDGPNVATYSGGEGGDTGNQHGRTDSGSAADTGGSNQSDGSSTYSTVDAGDLRQMMIFDHETSAIEVGASKNNTMKIRNATEEDLGNV
      
  201 MSEGTSKIHKRLRGVAAMTDPLPVPRTTGGPVKKGIEESSVSTILGGRPTSGSGAIPNVHPSLLLLPSQDVHAESAPKCVQDVSKTGSTCQSSKAEQDCS
      
  301 GIEGKIDLLLGNLEKVTRALDVLPEIREEIRNINKKITNLSLGLSTVEGYIKSMMIIIPGSGKPNPGDTPEVNPDLKAVIGRDNTRGLSEVRSQKINLES
      
  401 LTDDPPSLGTIDESHIVRDLDFTKSNAANFAPTNRFSSVMTMFNMIKEEVKDYNMRAGLTRWLEDAIERLDADDVYRALRRTLDRLAEDDEDDEEEDEN
                                                                          RLDADDVYRALRRTL 17.622 (476)


2299/2881) score = 18.513  9.275 (total and max score)
>gi|77124344|ref|YP_338081.1| fusion protein [J-virus]
    1 MKPVALIYLTILAFTVKVRSQLALSDLTKIGIIPAKSYELKISTQAAQQLMVIKLIPNVNGLTNCTIPVMDSYKKMLDRILKPIDDALNHVKNAIQDKQG
      
  101 DGVPGVRFWGAIIGGVALGVATSAQITAGVALHNSIQNANAILQLKESIRNSNKAIEELQAGLQSTVLVINALQDQINSQLVPAINTLGCSVIANTLGLR
      
  201 LNQYFSEISLVFGPNLRDPTSQTLSIQAIAKAFNGDFDSMMKKMHYTDSDFLDLLESDSIRGRIISVSLEDYLIIIQIDYPGLTTIPNSVVQTFNLITYN
                                                                SIRGRIISVSLEDYL  2.252 (266)
  301 YKGTEWESIFPRELLIRGSYISNIDISQCVGTSKSMICKSDTSTTISPATWACATGNLTSCARTRVVNSHSTRFALSGGVLFANCAPIACRCQDPQYSIN
                                                                                               CRCQDPQYSINQEPK  9.275 (397)
  401 QEPKTTNVMVTSEDCKELYIDGFYLTLGKKMLDRAMYAEDVALGGSVSVDPIDIGNELNSINESINKSHEYLDKANELLEQVNPNIVNVSSFSFILVISI
                 SEDCKELYIDGFYLT  6.986 (419)
  501 LLIIWFIVTLVWLIYLTKHMNFIVGKVAMGSRSSTVNSLSGFVG
      


2446/2881) score =  8.080  8.080 (total and max score)
>gi|77124345|ref|YP_338082.1| small hydrophobic protein [J-virus]
    1 MDIDAAITVSVIALIVFLWILTSTAWLVSIEMRIKSMLMRSARNHRDVSVGLIPRHPGPPDYSSVVTCI
                                                            RHPGPPDYSSVVTCI  8.080 (62)


2681/2881) score =  5.466  5.466 (total and max score)
>gi|77124346|ref|YP_338083.1| transmembrane protein [J-virus]
    1 MTSTVYEDPESALSGYESMRSDGARGLPALPRRCKTANTYRSARRVRVVTRRRVNNSVYFVFIIVCLAILVAMAAYVIIGIEGLKYTRYNSKDVGPDGSK
      
  101 RLEDIDQKLNQISSAVNTIMNALTYSVPSVLSTYRTSLLNRINHLATELKEAARMNNVDLDVKWGSNRTVLLKTGSRFHQLNTRELTTKNTLVTSYPRMP
      
  201 TIIPKVDKKPPSFYPLMKVDSDQDLNEKVKAVTKIFHDMSVTKDSQDEAIWNLNPASK
                   YPLMKVDSDQDLNEK  5.466 (221)