v1.1 03.04.09 Phosphorylation prediction results for Human papillomavirus type 88

                                                                                                                  Total     Max
   Rank                                                                                                           Score     Score
 384/2881) gi|167600369|ref|YP_001672011.1| E2 protein [Human papillomavirus type 88]                            118.928   24.331
 614/2881) gi|167600367|ref|YP_001672009.1| E7 protein [Human papillomavirus type 88]                             51.813   20.999
1532/2881) gi|167600368|ref|YP_001672010.1| E1 protein [Human papillomavirus type 88]                             28.227   14.688
1570/2881) gi|167600371|ref|YP_001672013.1| L2 protein [Human papillomavirus type 88]                             34.464   14.486
1663/2881) gi|167600370|ref|YP_001672012.1| E4 protein [Human papillomavirus type 88]                             25.258   14.051
2280/2881) gi|167600372|ref|YP_001672014.1| L1 protein [Human papillomavirus type 88]                             22.098    9.426


384/2881) score = 118.928 24.331 (total and max score)
>gi|167600369|ref|YP_001672011.1| E2 protein [Human papillomavirus type 88]
    1 MARMETQETLTERFVALQDAILNLIERGETDLRSQIQYWELVRKEQVILYYARKSGYNRLGLQPTPAPAVSEYNAKQAIHLQLMLKSLEKSKFAKEPWSL
      
  101 TDASAELVNTPPRDCFKKGGFTVTVYFDNDRENSFPYTQWEHIYYQDQNEQWHKVPGGVDHNGLYYDEENTNERVYFLLFEPESQKYGSSGQWTVHYKNT
        ASAELVNTPPRDCFK 12.834 (110)                           GVDHNGLYYDEENTN  7.592 (165)
        ASAELVNTPPRDCFK  3.950 (110)
  201 TVSASATSSSRRSSPISTKTDFDATTAGNTTTSAPQRSPRKRLQEAVSSTTSPPAHNLRSPGRGRGEGERTSGAKRRRTATDGNTLGESVPSPSQVGSRH
            TSSSRRSSPISTKTD 24.331 (214)                                                    GESVPSPSQVGSRHR 15.579 (294)
        SASATSSSRRSSPIS 17.073 (210)                                                      TLGESVPSPSQVGSR 12.992 (292)
                                    TTSAPQRSPRKRLQE 12.329 (238)               AKRRRTATDGNTLGE  2.699 (281)
            TSSSRRSSPISTKTD  4.105 (214)
            TSSSRRSSPISTKTD  2.753 (214)
               SRRSSPISTKTDFDA  2.691 (217)
  301 RAPERSGLSRLGRLQADAWDPPLIIIKGPANTLKCWRNRMKKNSSSNLVCSSVWRWIDSTTHENSRMLVAFQNTAERTRFLNSVTLPKGTTYAFGYLDSL
      


614/2881) score = 51.813 20.999 (total and max score)
>gi|167600367|ref|YP_001672009.1| E7 protein [Human papillomavirus type 88]
    1 MIGKEPSINDLEIKLEEHVLPANLLSNEVLSSDEETQEEEEREPFQIDTSCAFCEAGVRVFVLASPAGIRTLQQLLLAEISISCPGCSRNNFRHGRPQ
                                  VLSSDEETQEEEERE 20.999 (36)
                              LSNEVLSSDEETQEE 11.585 (32)
                             LLSNEVLSSDEETQE 10.615 (31)
                              LSNEVLSSDEETQEE  5.119 (32)
                             LLSNEVLSSDEETQE  3.495 (31)


1532/2881) score = 28.227 14.688 (total and max score)
>gi|167600368|ref|YP_001672010.1| E1 protein [Human papillomavirus type 88]
    1 MADPNKGTDTTDNFDCNSEWLLVDEAECVDDLDVLDELLEESTQCSTVSNLIDDDPVDIEDQGNSLALFNSQVTEDCNTAISALKRKLIKSPQLQTVAEL
      
  101 SPRLQAVSISPKKQSKRRLFDDSGIGEDEAQNTSQVALDSLESSLETSGAGLTINLLHCSNRQATVHLKFKELYGVSFKELTRNFKSDKSCSNSWVIAVY
        RLQAVSISPKKQSKR 14.688 (110)
        RLQAVSISPKKQSKR  5.450 (110)
  201 NAVEEVLEASKVQLQKHVEFLQLIVYGFHGLYLIVFKSTKNRDTVSKLFTEMLNVNALQLMCDPPRTRSVPVALFFYRKSLGNASFMYGEVPDWIKKQTL
      
  301 VEHQSASAAETFDFSSMVQWAYDNEFTEEAEIAYQYALAADEDPNAEAFLKHNNQYKFVKDCAAMVKMYRRYELRQMSMAEWIDKCCSKCTENGNWKIIA
                                TEEAEIAYQYALAAD  8.089 (334)
  401 TFLKHQNVQFLSFLIALKPFLQGVPKKNCLVFVGPPDTGKSYFCFSLIRFFGGKVVSFMNRNSHFWLQPLQDTKLGFLDDATHPCWVYMDINLRNGLDGN
      
  501 LVSLDAKHRAPMQMKLPPLLVTTNVDVMEDQSLRYLHSRLVCFKFPNKLPLNDDGSLVYEITNDTWACFFRKFATQLNLVLEDGENGNTGNSDRTFRCTA
      
  601 RCHIESN
      


1570/2881) score = 34.464 14.486 (total and max score)
>gi|167600371|ref|YP_001672013.1| L2 protein [Human papillomavirus type 88]
    1 MYKTRSKRDTAENLYRHCKATGNCPPDVENKIEGNTLADRLLRIFGSVIYLGGLGLGTGEGTTGIRPIEAPVETVRPDITVERPTVRPRPQRPTTFGTPI
      
  101 DRIGSADITPNVVKPTESSIVPLNESGIPDPTIIDSATGGGEGLGEYDILTTVDPNETLGATGGHPTTSGTLNNETAILDISPYEPPPKRFALAPSVHAE
       RIGSADITPNVVKPT 12.408 (109)                                               AILDISPYEPPPKRF 14.486 (184)
                                                                                  AILDISPYEPPPKRF  7.570 (184)
  201 ADITIIESSLPTESNINVFVDANITGEIVGEEIPLEPINSIEEFEIEAGRQTSTPREAVERFLGRARSLYNRYIQQIRTDNVDFLTRPSRAVQFEFENPA
      
  301 FTGDVSLEFARDVAEITAAPDPDFADIIRLGRPIFSETPGGTVRVSRLGTKGAISTRSGTIIGPRVHYYFDLSAIEPIEPDVIELSNLGEFSGESTIVDS
      
  401 ILSGHTVDPIAPFESTFSIADLEDPLLEDFSNSHLFVHFEEEDELISVPTLPPGAAIKAFVDDYADIIVSYPEMVNVNKIEIPATTLVPSEPDIRLDWFS
      
  501 PDYDLHPSLLRRRRKRKRNMF
      


1663/2881) score = 25.258 14.051 (total and max score)
>gi|167600370|ref|YP_001672012.1| E4 protein [Human papillomavirus type 88]
    1 MIEKTAFPTHNGNIFIIRTRTSSGIKCQVVLITMGCTMMRKIPMKGYISFYLSLSLKNMAVVDNGLCIIKILLFLPLPPALLGGPHPSPPKPISTPQPPA
      
  101 TPRPLPRREVQGSDYKRRSAQPPPRRPTIFDLQEEDEEKENEPPEQREEEQPPTETLSENLSRLLRRWDQDIEHLKDLVSRDLDDFKRTLGIPH
                          QPPPRRPTIFDLQEE 14.051 (128)
             REVQGSDYKRRSAQP 11.207 (115)


2280/2881) score = 22.098  9.426 (total and max score)
>gi|167600372|ref|YP_001672014.1| L1 protein [Human papillomavirus type 88]
    1 MALWQQQTGKLFLPPAKPVAKILSTDDYVIGTQLHFHAGTDRLLTVDHPYYEIRNDGDPNKIEIPKVSACQYRVFRLKLPDPNKFALIDQSIFNPERERL
      
  101 VWKLKGIQIGRGGPLNVGTAGHPLFNKAPDTENPNDYPPAQTDEDRRNVSMDPKHTQLFIIGCIPADGEYWDVAKPCVGDQANAGDCPPIQLVNAVIQDG
                                                                    CIPADGEYWDVAKPC  9.426 (170)
                                                                    CIPADGEYWDVAKPC  7.744 (170)
  201 TMGDTGFGAANFKNFLQDKAGVPLDIINDICMYPDFLKMDKDVYGDKCFFFGKREQSYARHFMAREGKMGDAIPEGNKYLLPPTNAVNFKMGSHVYFPTA
                                                        FGKREQSYARHFMAR  7.038 (258)
  301 SGSLTTSDSNLFNRPYWLQRSLGANNGICWGNQLFVTVLDNSRNTNFTLSIYNQGGAIGNQYTYKSQDFTQYTRHAEEYELEAIFQLCRVPLEPDILAHL
      
  401 NVMNPNILDEWQLAFVPPPPQSIEDNYRYITSLATRCPTENPAPEIPDPYKDYNFWLVDLQEKFSSELDQFSLGRKFLFQSGLLPTKRVRTVANSSVRNT
                         PQSIEDNYRYITSLA -2.111 (427)
  501 SRTVKRKRTR