v1.1 03.04.09 Phosphorylation prediction results for Human papillomavirus type 16

                                                                                                                  Total     Max
   Rank                                                                                                           Score     Score
  94/2881) gi|9627105|ref|NP_041326.1| transforming protein [Human papillomavirus type 16]                        74.052   32.709
 636/2881) gi|9627101|ref|NP_041327.1| replication protein [Human papillomavirus type 16]                         68.464   20.815
1155/2881) gi|9627107|ref|NP_041331.1| minor capsid protein [Human papillomavirus type 16]                        60.229   16.763
2010/2881) gi|9627106|ref|NP_041328.1| regulatory protein [Human papillomavirus type 16]                          37.211   12.439
2338/2881) gi|9627104|ref|NP_041325.1| transforming protein [Human papillomavirus type 16]                         9.006    9.006
2647/2881) gi|9627108|ref|NP_041332.1| major capsid protein [Human papillomavirus type 16]                        10.777    6.701
2652/2881) gi|9627102|ref|NP_041329.1| hypothetical protein HpV16gp5 [Human papillomavirus type 16]               22.387    6.593


94/2881) score = 74.052 32.709 (total and max score)
>gi|9627105|ref|NP_041326.1| transforming protein [Human papillomavirus type 16]
    1 MHGDTPTLHEYMLDLQPETTDLYCYEQLNDSSEEEDEIDGPAGQAEPDRAHYNIVTFCCKCDSTLRLCVQSTHVDIRTLEDLLMGTLGIVCPICSQKP
                             CYEQLNDSSEEEDEI 32.709 (31)
                              YEQLNDSSEEEDEID 20.963 (32)
                             CYEQLNDSSEEEDEI  8.700 (31)
                             CYEQLNDSSEEEDEI  8.286 (31)
                              YEQLNDSSEEEDEID  3.395 (32)


636/2881) score = 68.464 20.815 (total and max score)
>gi|9627101|ref|NP_041327.1| replication protein [Human papillomavirus type 16]
    1 MADPAGTNGEEGTGCNGWFYVEAVVEKKTGDAISDDENENDSDTGEDLVDFIVNDNDYLTQAETETAHALFTAQEAKQHRDAVQVLKRKYLVSPLSDISG
                                        DDENENDSDTGEDLV 20.815 (42)
                                KKTGDAISDDENEND 14.974 (34)
                                KKTGDAISDDENEND 10.446 (34)
                                KKTGDAISDDENEND  9.427 (34)
  101 CVDNNISPRLKAICIEKQSRAAKRRLFESEDSGYGNTEVETQQMLQVEGRHETETPCSQYSGGSGGGCSQYSSGSGGEGVSERHTICQTPLTNILNVLKT
                                                                      GGGCSQYSSGSGGEG  2.843 (172)
  201 SNAKAAMLAKFKELYGVSFSELVRPFKSNKSTCCDWCIAAFGLTPSIADSIKTLLQQYCLYLHIQSLACSWGMVVLLLVRYKCGKNRETIEKLLSKLLCV
      
  301 SPMCMMIEPPKLRSTAAALYWYKTGISNISEVYGDTPEWIQRQTVLQHSFNDCTFELSQMVQWAYDNDIVDDSEIAYKYAQLADTNSNASAFLKSNSQAK
      
  401 IVKDCATMCRHYKRAEKKQMSMSQWIKYRCDRVDDGGDWKQIVMFLRYQGVEFMSFLTALKRFLQGIPKKNCILLYGAANTGKSLFGMSLMKFLQGSVIC
      
  501 FVNSKSHFWLQPLADAKIGMLDDATVPCWNYIDDNLRNALDGNLVSMDVKHRPLVQLKCPPLLITSNINAGTDSRWPYLHNRLVVFTFPNEFPFDENGNP
                                                                                                    DENGNPVYELNDKNW -0.075 (602)
  601 VYELNDKNWKSFFSRTWSRLSLHEDEDKENDGDSLPTFKCVSGQNTNTL
                   SRTWSRLSLHEDEDK  6.010 (621)
                   SRTWSRLSLHEDEDK  4.024 (621)


1155/2881) score = 60.229 16.763 (total and max score)
>gi|9627107|ref|NP_041331.1| minor capsid protein [Human papillomavirus type 16]
    1 MRHKRSAKRTKRASATQLYKTCKQAGTCPPDIIPKVEGKTIAEQILQYGSMGVFFGGLGIGTGSGTGGRTGYIPLGTRPPTATDTLAPVRPPLTVDPVGP
                                                                                                      PVGPSDPSIVSLVEE  5.456 (104)
  101 SDPSIVSLVEETSFIDAGAPTSVPSIPPDVSGFSITTSTDTTPAILDINNTVTTVTTHNNPTFTDPSVLQPPTPAETGGHFTLSSSTISTHNYEEIPMDT
                                                                                           STISTHNYEEIPMDT 11.830 (193)
  201 FIVSTNPNTVTSSTPIPGSRPVARLGLYSRTTQQVKVVDPAFVTTPTKLITYDNPAYEGIDVDNTLYFSSNDNSINIAPDPDFLDIVALHRPALTSRRTG
            PNTVTSSTPIPGSRP  3.104 (214)               ITYDNPAYEGIDVDN  8.822 (257)
                                                       ITYDNPAYEGIDVDN  8.573 (257)
                                                  TPTKLITYDNPAYEG  5.148 (252)
                                                       ITYDNPAYEGIDVDN  0.534 (257)
  301 IRYSRIGNKQTLRTRSGKSIGAKVHYYYDLSTIDPAEEIELQTITPSTYTTTSHAASPTSINNGLYDIYADDFITDTSTTPVPSVPSTSLSGYIPANTTI
                                                                              FITDTSTTPVPSVPS 16.763 (380)
  401 PFGGAYNIPLVSGPDIPINITDQAPSLIPIVPGSPQYTIIADAGDFYLHPSYYMLRKRRKRLPYFFSDVSLAA
      


2010/2881) score = 37.211 12.439 (total and max score)
>gi|9627106|ref|NP_041328.1| regulatory protein [Human papillomavirus type 16]
    1 METLCQRLNVCQDKILTHYENDSTDLRDHIDYWKHMRLECAIYYKAREMGFKHINHQVVPTLAVSKNKALQAIELQLTLETIYNSQYSNEKWTLQDVSLE
                     LTHYENDSTDLRDHI  4.911 (23)
  101 VYLTAPTGCIKKHGYTVEVQFDGDICNTMHYTNWTHIYICEEASVTVVEGQVDYYGLYYVHEGIRTYFVQFKDDAEKYSKNKVWEVHAGGQVILCPTSVF
                                                    VVEGQVDYYGLYYVH 10.375 (154)                        VFSSNEVSSPEIIRQ 12.439 (206)
                                                        QVDYYGLYYVHEGIR  9.487 (158)
  201 SSNEVSSPEIIRQHLANHPAATHTKAVALGTEETQTTIQRPRSEPDTGNPCHTTKLLHRDSVDSAPILTAFNSSHKGRINCNSNTTPIVHLKGDANTLKC
      
  301 LRYRFKKHCTLYTAVSSTWHWTGHNVKHKSAIVTLTYDSEWQRDQFLSQVKIPKTITVSTGFMSI
      


2338/2881) score =  9.006  9.006 (total and max score)
>gi|9627104|ref|NP_041325.1| transforming protein [Human papillomavirus type 16]
    1 MHQKRTAMFQDPQERPRKLPQLCTELQTTIHDIILECVYCKQQLLRREVYDFAFRDLCIVYRDGNPYAVCDKCLKFYSKISEYRHYCYSLYGTTLEQQYN
                                                                 VYRDGNPYAVCDKCL  9.006 (67)
  101 KPLCDLLIRCINCQKPLCPEEKQRHLDKKQRFHNIRGRWTGRCMSCCRSSRTRRETQL
      


2647/2881) score = 10.777  6.701 (total and max score)
>gi|9627108|ref|NP_041332.1| major capsid protein [Human papillomavirus type 16]
    1 MQVTFIYILVITCYENDVNVYHIFFQMSLWLPSEATVYLPPVPVSKVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFR
      
  101 IHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSP
      
  201 CTNVAVNPGDCPPLELINTVIQDGDMVHTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDD
                                                                                                    ENVPDDLYIKGSGST  6.701 (302)
  301 LYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQF
      
  401 IFQLCKITLTADVMTYIHSMNSTILEDWNFGLQPPPGGTLEDTYRFVTQAIACQKHTPPAPKEDDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQAGL
                                                       AIACQKHTPPAPKED  4.076 (457)
  501 KAKPKFTLGKRKATPTTSSTSTTAKRKKRKL
      


2652/2881) score = 22.387  6.593 (total and max score)
>gi|9627102|ref|NP_041329.1| hypothetical protein HpV16gp5 [Human papillomavirus type 16]
    1 YYVLHLCLAATKYPLLKLLGSTWPTTPPRPIPKPSPWAPKKHRRLSSDQDQSQTPETPATPLSCCTETQWTVLQSSLHLTAHTKDGLTVIVTLHP
                                            PKKHRRLSSDQDQSQ  6.593 (46)
                                            PKKHRRLSSDQDQSQ  6.175 (46)
                                 PRPIPKPSPWAPKKH  5.927 (35)
                        LGSTWPTTPPRPIPK  3.692 (26)