v1.1 03.04.09 Phosphorylation prediction results for Human papillomavirus - cand90

                                                                                                                  Total     Max
   Rank                                                                                                           Score     Score
 276/2881) gi|22138129|ref|NP_671509.1| putative major capsid protein L1 [Human papillomavirus - cand90]         104.066   26.632
 678/2881) gi|22138127|ref|NP_671507.1| putative E4 protein [Human papillomavirus - cand90]                      100.434   20.425
1006/2881) gi|22138126|ref|NP_671506.1| putative regulatory protein E2 [Human papillomavirus - cand90]            21.532   17.696
1428/2881) gi|22138124|ref|NP_671504.1| putative transforming protein E7 [Human papillomavirus - cand90]          40.949   15.187
1481/2881) gi|22138125|ref|NP_671505.1| putative replication protein E1 [Human papillomavirus - cand90]           62.246   14.920
1714/2881) gi|22138128|ref|NP_671508.1| putative minor capsid protein L2 [Human papillomavirus - cand90]          39.774   13.825
2803/2881) gi|22138123|ref|NP_671503.1| putative transforming protein E6 [Human papillomavirus - cand90]           2.843    2.843


276/2881) score = 104.066 26.632 (total and max score)
>gi|22138129|ref|NP_671509.1| putative major capsid protein L1 [Human papillomavirus - cand90]
    1 MAMWKPSDNKVYLPPAPVSKVLSTDAYVSRTNIYYYAGSSRLLTVGHPYFAIKKQSGKNPIVVPKVSGYQYRVFRVRLPDPNKFGLPDASLYNPDSQRLV
                                                      YFAIKKQSGKNPIVV 12.428 (56)
  101 WACTGVEVGRGQPLGVGVSGHPLYNRLYDTENTNLYDVVPGDDTRDNLTMDYKQTQLFIIGCKPPLGEHWAKGTPCNMSNVQAGDCPPIELKSSTIQDGD
                                  DTENTNLYDVVPGDD 10.037 (136)
  201 MIDTGFGALDFAALQTNKSDVPLDIVTTTCKYPDFLQMAAEPYGDLMFFCLRREQMFIRHFYNRAGTMGDAIPDGFVLKGTSSTSRGTPTSSVYGSTPSG
                                                                                      TSSTSRGTPTSSVYG 19.704 (288)
  301 SMVTSESQLFNKPYWLQRAQGPNNGICWGNQLFVTVVDTTRSTNMTICATQTPSDTYKASNFKEYMRHGEEFDLQFIFQLCVINLTTEVMAYLHGMNATL
      
  401 LEDWNFGSLPPPTASLGDTYRFLQSQAISCQKPSAVPTENKDPYAGLTFWEVDLSERFSLELDQFPLGRKFLLQRGTRVRSSPVSRKRPAPSTAPSTKRK
                                          PTENKDPYAGLTFWE  8.619 (444)          RGTRVRSSPVSRKRP 26.632 (482)
                                                                               QRGTRVRSSPVSRKR 14.266 (481)
                                                                                          SRKRPAPSTAPSTKR 12.379 (492)
  501 RSKRS
      


678/2881) score = 100.434 20.425 (total and max score)
>gi|22138127|ref|NP_671507.1| putative E4 protein [Human papillomavirus - cand90]
    1 MMHSTPLCLAPRTPTKNRYPLLDLLTPHTPTNPTPPTPPRCWAPRRHTCRRRISVSDSDTDISIPTPQKTGSSGWHVTTQGTSVTLTAQSSTGTSVSVTV
           PLCLAPRTPTKNRYP  2.475 (13)              HTCRRRISVSDSDTD 20.425 (54)
                                                      CRRRISVSDSDTDIS 19.748 (56)
                                                    HTCRRRISVSDSDTD 18.568 (54)
                                                    HTCRRRISVSDSDTD 15.003 (54)
                                                    HTCRRRISVSDSDTD  8.271 (54)
                                                      CRRRISVSDSDTDIS  7.733 (56)
                                                    HTCRRRISVSDSDTD  5.711 (54)
                                   PTNPTPPTPPRCWAP  2.501 (37)
  101 HL
      


1006/2881) score = 21.532 17.696 (total and max score)
>gi|22138126|ref|NP_671506.1| putative regulatory protein E2 [Human papillomavirus - cand90]
    1 METLASRLNACREKLLELYETDSDQLQDQIMHWGLVRLENVIMYKAREAGMLHLNHQVVPVQLIAKAKACKAIEMQLALKTLLKSPYGTEPWTLRDTSQE
                   KLLELYETDSDQLQD 17.696 (21)
  101 MWDAAPKQCWKKKGYTVDVKFDGEDTKTMCYTCWRYIYVQSGDDDTWTKVSGHVDHAGLYFTHEGTRVTYVRFAQEAQTYGNTGTWEVHVGGQLIYDAFD
      
  201 SSVSSTQDTDQEPLSSTRPTDPPYTDEPDATNPAQVLGPASPHVPPPHKRQRLGHGYQHPDSTEDRIQRLARDNTGDQCNPDSAKQHGNIRVGDSAPVTH
       SVSSTQDTDQEPLSS  3.836 (209)
  301 LRGDPNKLKCLRYRLHKHKSVLFSKVTSTWRWSTCSNTTNEKSAFVTLWHDSAEQRATFLSTITLPKDIEAVLGYMTMLA
      


1428/2881) score = 40.949 15.187 (total and max score)
>gi|22138124|ref|NP_671504.1| putative transforming protein E7 [Human papillomavirus - cand90]
    1 MHGQRPTLKDIFLELDQPDAVDLHCNEQLASSEEEDNREDGEQPTQPTEPAQQAYRVVTSCCRCCCTVRLVVESGHAEIRQLQELLLGALHIVCPLCA
                             HCNEQLASSEEEDNR 15.187 (31)
                              CNEQLASSEEEDNRE 14.508 (32)
                             HCNEQLASSEEEDNR  7.808 (31)
                             HCNEQLASSEEEDNR  3.446 (31)


1481/2881) score = 62.246 14.920 (total and max score)
>gi|22138125|ref|NP_671505.1| putative replication protein E1 [Human papillomavirus - cand90]
    1 MADGEGTNNGDDSEEGRSACGWFWVEATVDRTTGQQISSDEDEEDGDSGQDMVDFIDNSRHPGDGQEVALELYRQQEAQDDEAFVQALKRKYLASPLAAG
                                    RTTGQQISSDEDEED 13.800 (38)
                                     TTGQQISSDEDEEDG 11.846 (39)
                                     TTGQQISSDEDEEDG 11.225 (39)
                                    RTTGQQISSDEDEED 10.454 (38)
  101 VCVDKDLSPRLDAITLGRSSQKAKRRLFELQDSGYGNTQVDIDATEDQVVGESRGGAGTGGVQETEEEERQGGDGAPGAVTAPAQSGTDAILSLLKTSNL
      
  201 RATLLGKFKDIYGLSFMELARQFKSNRTTCLDWVICAFGVYCTVAEGVKTLIQQHCQYAHIQVQTSNWGMVVLMLVRYNCAKNRDTVAKCMGRLLNIPEQ
      
  301 HMLIEPPKIRHPAAALYWYKAGMGNASEIIGETPEWIVRQTVVGHSLEECQFQLSVMVQWAYDHDITDESILAYEYAKLADVDGNAAAFLASNCQAKYVK
      
  401 DACTMCRHYKRAEQAQMTMSEWIRFRSAKISEEGDWRPIVRFLRHHDIEFITFVISLKNFLKGIPKKCCIVIYGPADTGKSYFCMSLLRFLGGVVISYAN
                         SEWIRFRSAKISEEG 14.920 (427)
  501 STSHFWLQPLCDAKIGLIDDVTPQCWSYIDTYLRNALDGNQVCVDRKHRPLLQLKCPPLLMTTNTNPLEEDRWKFLRSRLQLFTFPNAFPVNQKGDPLYT
      
  601 LNDANWKCFFQRLWARLDLHEQDDQEDNGDIGQPFKCVPGEVARTV
      


1714/2881) score = 39.774 13.825 (total and max score)
>gi|22138128|ref|NP_671508.1| putative minor capsid protein L2 [Human papillomavirus - cand90]
    1 MHRSKRRKRASATQLYQTCKLAGTCPSDVINKVEHTTLADKILQWGSLGVFFGGLGIGTGSGTGGRTGYIPIGTRPPTVVDVGPPARPPVVIEPVGASDP
      
  101 SIVTLVEDSSIIASGSPHPTFTGTGGFEVTTASTTTPAVLDITPSGGNVQVSSSSFINPLFTEPAIVEPPQAGEVTGHVLVSTPTAGSHGYEEIPMQTFA
                                                                                         PTAGSHGYEEIPMQT  6.715 (191)
                                                                                 TGHVLVSTPTAGSHG  3.920 (183)
  201 VRGTGDEPIISTPLPGVRRVAGPRLYSRAYQQVHVQDPRFLSQPETLVTYDNPVFDTEETILFEHPSIHQVPDPDFLDIVALHRPALTARRGTVRYSRLG
          GDEPIISTPLPGVRR  5.156 (212)          QPETLVTYDNPVFDT -1.509 (250)
  301 QRATLKTRSGKRIGATVHFYQDLSPIAPVADELEMQPLVSDTPDYLDSLYDIYADTASVSRHRTLTPTRPSTPLQAPSVTASSALSSAASNTTVPLSTGL
                                                                VSRHRTLTPTRPSTP 13.825 (366)
                                                PDYLDSLYDIYADTA  8.083 (350)
                                                                      LTPTRPSTPLQAPSV  3.585 (372)
  401 DIPVFSGPDSALPDSHAVWPVPPAPPGVVPGSVLVNGSTYYLLPPLGLLPKKRKRFPYFFADGNVEA
      


2803/2881) score =  2.843  2.843 (total and max score)
>gi|22138123|ref|NP_671503.1| putative transforming protein E6 [Human papillomavirus - cand90]
    1 MTNGDYCPRNIFLLCKVYELDLQDLNITCVFCGTALTEEEVVSFAYKELQVVWRKHFPFAACPACLEAAGKLRQFRYWQYSSYAPTVEYETGVPILELLI
      
  101 RCYLCHKPLCSEEKERLISEGKRFHKIAGLWRGACLQCWKPCMANDQP
                 EEKERLISEGKRFHK  2.843 (119)