v1.1 03.04.09 Phosphorylation prediction results for Human papillomavirus - 54

                                                                                                                  Total     Max
   Rank                                                                                                           Score     Score
 549/2881) gi|9628441|ref|NP_043291.1| regulatory protein [Human papillomavirus - 54]                             81.977   21.678
 914/2881) gi|9628440|ref|NP_043290.1| replication protein [Human papillomavirus - 54]                           118.748   18.302
 931/2881) gi|9628439|ref|NP_043289.1| transforming protein [Human papillomavirus - 54]                           42.193   18.193
1875/2881) gi|9628443|ref|NP_043293.1| minor capsid protein [Human papillomavirus - 54]                           43.057   13.110
2308/2881) gi|9628444|ref|NP_043294.1| major capsid protein [Human papillomavirus - 54]                           30.289    9.199
2805/2881) gi|9628442|ref|NP_043292.1| hypothetical protein HpV54gp5 [Human papillomavirus - 54]                   2.811    2.811


549/2881) score = 81.977 21.678 (total and max score)
>gi|9628441|ref|NP_043291.1| regulatory protein [Human papillomavirus - 54]
    1 METLATRLDVCQERLLDLYEKDSNKLEDQIEHWKCIRLECALQYKAREMGYKVLQHQALPALAVSKGKGHKAIELQLALETLQKTVYSTEPWTLQDTCLE
      
  101 RWNAPPTGCLKRRGQTVDVIFDGHQDNTMQYVMWGDIYYQNCDGEGWTKVCSNIDAMGIYYMDAEHKVYYVDFKKEASKYGEYGQWEVRMGSSIIFSPAS
                                                                                 EASKYGEYGQWEVRM 11.435 (183)
                                                          NIDAMGIYYMDAEHK  8.472 (160)              IFSPASVSSTEEALS  4.127 (202)
                                                                                 EASKYGEYGQWEVRM  8.254 (183)
                                                                                                  SIIFSPASVSSTEEA  2.286 (200)
  201 VSSTEEALSISSTGTAEHTRPANSTPRTDNSTKAIPCTPPPRKRARVYSTDQQPHSTSDPVGCDNDRHISDDNNKNQGRHTSSGDTTPIVHFKGEPNTLK
                                    STKAIPCTPPPRKRA 21.678 (238)
                                    STKAIPCTPPPRKRA 19.260 (238)
                                               RKRARVYSTDQQPHS  6.466 (249)
  301 CFRQRIQKYKHLFEQASSTWHWACVPGTTKNRGIVTLTYSSVEQRQQFLVTVRIPPSISMSLGVMSL
      


914/2881) score = 118.748 18.302 (total and max score)
>gi|9628440|ref|NP_043290.1| replication protein [Human papillomavirus - 54]
    1 MADNQGTEEEGTGCNGWFFVEAIVERKTGDIISDDEPEDVEDSGLDMVDFIDNSVSQVEGQENPQALLHAQQLQADVEAVQQLKRKYIGSPYVSPVANSE
                               RKTGDIISDDEPEDV 18.302 (33)                              LKRKYIGSPYVSPVA 16.867 (90)
                                                      DFIDNSVSQVEGQEN 12.671 (56)           YIGSPYVSPVANSEP 15.665 (94)
                               RKTGDIISDDEPEDV  5.674 (33)                              LKRKYIGSPYVSPVA 14.709 (90)
                               RKTGDIISDDEPEDV  3.781 (33)                                RKYIGSPYVSPVANS  7.861 (92)
  101 PCVEKDLSPRLGAISLGRRSAKAKRRLFDKAQPPPNGHTDVEAAVEVNTEGTDETETDQVQTVSGETTTDSLGRQQITELIHNTNIRVALFGMFKDLYGL
      PCVEKDLSPRLGAIS 12.281 (108)
  201 SFMDLARPFKSDKTVCTDWVIAAFGIYHGITDGFKTLLEPHCLYGHIQWLTCRWGMVLLLLTRFKCGKNRLTVSKCLGMLLNIPETQMLIDPPKLRTPAA
      
  301 ALYWYRQGLSNASEIFGTPPEWLARQTVIEYSLADSQFDLSKMVQWAYDHNYIDDSIIALEYAKLADIDENAAAFLGSNCQAKYVKDCGTMCRHYIRAQK
                NASEIFGTPPEWLAR  5.154 (318)
  401 MQMTMSQWIKHRCDLVEEEGEWKEIVRFLRYQHVDFISFMIALKQFLQGIPKHNCILLYGPPDTGKSNFAMSLISFLGGVVLSYVNSSSHFWLEPLADAK
      
  501 IAMLDDATTQCWNYMDIYMRNALDGNPMCFDRKHRAMVQTKCPPLIVTSNINASTDDRWRYLHSRVKCFCFPNRFPFDSNGNPVYDLSNKNWKSFFKRSW
                                                                                   DSNGNPVYDLSNKNW  7.169 (585)
                                                                                   DSNGNPVYDLSNKNW -1.386 (585)
  601 SRLALNDNDNEEEENGDPSNTFRCVPGKASRPI
      


931/2881) score = 42.193 18.193 (total and max score)
>gi|9628439|ref|NP_043289.1| transforming protein [Human papillomavirus - 54]
    1 MHGNVATIEDIVLDLKPEPFDLYCREQLEDSDAEDETAVTQPDKQAFKVLSQCGGVCCKTVRLCVYSTHTGIRVLQELLHQDALQIVCPTCASRL
                             CREQLEDSDAEDETA 18.193 (31)
                             CREQLEDSDAEDETA 16.692 (31)
                             CREQLEDSDAEDETA  7.307 (31)


1875/2881) score = 43.057 13.110 (total and max score)
>gi|9628443|ref|NP_043293.1| minor capsid protein [Human papillomavirus - 54]
    1 MAKARAPRRKRASATQLYQTCKASGTCPSDVIPKVEGTTIADQILRWGSMGVFFGGLGIGTGSGTGGRTGYIPLGRPSTTLEPGPPVRPAGAVETVAPSD
                                                                                                       PSDPSIVSLVEESSV 13.110 (105)
                                                                                                    TVAPSDPSIVSLVEE  6.059 (102)
  101 PSIVSLVEESSVVDVGAPTPTIPSQGGFEIATSSDATPAILDVTSTTTPIRVSITSHDNPIYTEPSLLDPPPPVQMDGRVLVSTSTLQSSTAENIPMDTF
                                                            TSHDNPIYTEPSLLD -1.382 (162)
  201 IIMQDHIGTTTSTPIPRPPARPRLGLYSRALQQVPVQDPAFLQQPSSLITYDNPVYEGNPDVTLHFEQPTIHNAPDPAFMDIFALHRPALTTRRGVVRYS
                                                      ITYDNPVYEGNPDVT  8.402 (256)
                                                 QPSSLITYDNPVYEG  4.967 (251)
                                                      ITYDNPVYEGNPDVT  0.595 (256)
  301 RVGDRATLHTRSGLQLKPRVHFFQDLSPIAHVPEEIELHPLISANNTSINNGLYSDIYDVYADTDFADTGGFSSSTVSHSSVQTALQTTSIPSQYGNTTV
                                                           YSDIYDVYADTDFAD 11.307 (361)
  401 PLTASSPYTPIPTSFRPSSGHTPFVPARPIFPQTPIAVNGGDFYLHPSYTYVRKRRKRFPYFLADGYVAA
      


2308/2881) score = 30.289  9.199 (total and max score)
>gi|9628444|ref|NP_043294.1| major capsid protein [Human papillomavirus - 54]
    1 MWRPSENKVYLPPTPVSKVVSTDEYVTRTSIYYHASSSRLLAVGHPYFKVQKTNNKQSIPKVSGYQYRVFRVQLPDPNKFGLPDPSLYNPETQRLVWACT
                                                                                      GLPDPSLYNPETQRL  8.582 (88)
  101 GVEVGRGQPLGLGLSGHPLLNKLDDTENAPKYVGAGADNRENVSMDYKQTQLCILGCTPPIGEHWAKGNLCTPNTLAAGDCPPLELVNSYIQDGDMVDIG
      
  201 FGAMDFKTLQTSKSEVPLDVATSICKYPDYLKMAAEAYGDSLFFYLRREQMFVRHMLNRAGTMGEPVPNDLYIKKSSGNLDSSIYAATPSGSMVTSEYQI
                                                                                   GNLDSSIYAATPSGS  7.377 (285)
  301 FNKPYWLQRAQGQNNGICWGNQVFLTVVDTTRSTNLTLCATASTQDSFNNSDFREYIRHVEEYDLQFIFQLCTITLTADVMAYIHGMNPTILEDWNFGIT
      
  401 PPATSSLEDTYRFVQSQAIACQKNNAPAKEKEDPYSKFNFWTVDLKERFSSDLDQFPLGRKFLLQAGLRARPRLRPVKRAAPSSSKGTARKRAKTKR
                                 AKEKEDPYSKFNFWT  9.199 (435)
                                 AKEKEDPYSKFNFWT  4.625 (435)
         TSSLEDTYRFVQSQA -2.340 (411)            DLKERFSSDLDQFPL  2.846 (451)


2805/2881) score =  2.811  2.811 (total and max score)
>gi|9628442|ref|NP_043292.1| hypothetical protein HpV54gp5 [Human papillomavirus - 54]
    1 MQWVFIIWMQNTKCIMWILKRKHLSMGNMDSGRCVWAAASFFLLHLYLVPKRHCQYPLLALLNTPDQPIPHHVPTTPQKQSRARRRLENELESTAQTSNH
                                                                                                       SNHTAPQTPWAVTTT  2.811 (105)
  101 TAPQTPWAVTTTGTSVTITTRTKDGTQVVVTLHL