v1.1 03.04.09 Phosphorylation prediction results for Human T-lymphotropic virus 2

                                                                                                                  Total     Max
   Rank                                                                                                           Score     Score
  21/2881) gi|9626728|ref|NP_041003.1| pol polyprotein [Human T-lymphotropic virus 2]                             96.796   44.082
 478/2881) gi|9626729|ref|NP_041004.1| rex 26 kD protein [Human T-lymphotropic virus 2]                           71.993   22.756
1512/2881) gi|9626727|ref|NP_041002.1| gag polyprotein [Human T-lymphotropic virus 2]                             14.752   14.752
2142/2881) gi|9626730|ref|NP_041006.1| env propeptide [Human T-lymphotropic virus 2]                              14.512   10.928
2721/2881) gi|9626731|ref|NP_041005.1| tax protein [Human T-lymphotropic virus 2]                                  7.782    4.557


21/2881) score = 96.796 44.082 (total and max score)
>gi|9626728|ref|NP_041003.1| pol polyprotein [Human T-lymphotropic virus 2]
    1 HRSRPYGYTPDTRARAGKAPRHPDPRRQWANQHPVQTPPNPPTHILALPKVPRYPFLLPLRHPQQMDHHWKGRPTTMPGASIPPRRPQPPPIAANSHSKH
       RSRPYGYTPDTRARA 13.941 (9)                                                                        HHRPRTPSPTSPSGP 13.650 (107)
                                                                                                         HHRPRTPSPTSPSGP  8.359 (107)
                                                                                                         HHRPRTPSPTSPSGP  3.463 (107)
  101 HRPRTPSPTSPSGPISFKPERLQALNDLVSKALEAGHIEPYSGPGNNPVFPVKKPNGKWRFIHDLRATNAITTTLTSPSPGPPDLTSLPTALPHLQTIDL
       RPRTPSPTSPSGPIS 44.082 (109)
        PRTPSPTSPSGPISF  4.869 (110)
  201 TDAFFQIPLPKQYQPYFAFTIPQPCNYGPGTRYAWTVLPQGFKNSPTLFEQQLAAVLNPMRKMFPTSTIVQYMDDILLASPTNEELQQLSQLTLQALTTH
      
  301 GLPISQEKTQQTPGQIRFLGQVISPNHITYESTPTIPIKSQWTLTELQVILGEIQWVSKGTPILRKHLQSLYSALHGYRDPRACITLTPQQLHALHAIQQ
                               NHITYESTPTIPIKS  3.326 (333)
  401 ALQHNCRGRLNPALPLLGLISLSTSGTTSVIFQPKQNWPLAWLHTPHPPTSLCPWGHLLACTILTLDKYTLQHYGQLCQSFHHNMSKQALCDFLRNSPHP
      
  501 SVGILIHHMGRFHNLGSQPSGPWKTLLHLPTLLQEPRLLRPIFTLSPVVLDTAPCLFSDGSPQKAAYVLWDQTILQQDITPLPSHETHSAQKGELLALIC
      
  601 GLRAAKPWPSLNIFLDSKYLIKYLHSLAIGAFLGTSAHQTLQAALPPLLQGKTIYLHHVRSHTNLPDPISTFNEYTDSLILAPLVPLTPQGLHGLTHCNQ
      
  701 RALVSFGATPREAKSLVQTCHTCQTINSQHHMPRGYIRRGLLPNHIWQGDVTHYKYKKYKYCLHVWVDTFSGAVSVSCKKKETSCETISAVLQAISLLGK
      
  801 PLHINTDNGPAFLSQEFQEFCTSYRIKHSTHIPYNPTSSGLVERTNGVIKNLLNKYLLDCPNLPLDNAIHKALWTLNQLNVMNPSGKTRWQIHHSPPLPP
                                                                                                        PPIPEASTPPKPPPK  5.105 (906)
  901 IPEASTPPKPPPKWFYYKLPGLTNQRWKGPLQSLQEAAGAALLSIDGSPRWIPWRFLKKAACPRPDASELAEHAATDHQHHG
      


478/2881) score = 71.993 22.756 (total and max score)
>gi|9626729|ref|NP_041004.1| rex 26 kD protein [Human T-lymphotropic virus 2]
    1 MPKTRRQRTRRARRNRPPTPWPISQDLDRASYMDTPSTCLAIVYRPIGVPSQVVYVPPAYIDMPSWPPVQSTNSPGTPSMDALSALLSNTLSLASPPSPP
                      PPTPWPISQDLDRAS  5.953 (24)                                            SNTLSLASPPSPPRE 13.466 (95)
                                                                                                LSLASPPSPPREPQG 13.194 (98)
                                                                                                LSLASPPSPPREPQG  5.883 (98)
  101 REPQGPSRSLPLPPLLSPPRFHLPSFNQCESTPPTEMDAWNQPSGISSPPSPSPNLASVPKTSTPPGEKP
                                              NQPSGISSPPSPSPN 22.756 (148)
                                                 SGISSPPSPSPNLAS  7.317 (151)
                              SFNQCESTPPTEMDA  3.424 (132)


1512/2881) score = 14.752 14.752 (total and max score)
>gi|9626727|ref|NP_041002.1| gag polyprotein [Human T-lymphotropic virus 2]
    1 MGQIHGLSPTPIPKAPRGLSTHHWLNFLQAAYRLQPRPSDFDFQQLRRFLKLALKTPIWLNPIDYSLLASLIPKGYPGRVVEIINILVKNQVSPSAPAAP
      
  101 VPTPICPTTTPPPPPPPSPEAHVPPPYVEPTTTQCFPILHPPGAPSAHRPWQMKDLQAIKQEVSSSALGSPQFMQTLRLAVQQFDPTAKDLQDLLQYLCS
                                                                IKQEVSSSALGSPQF 14.752 (166)
  201 SLVVSLHHQQLNTLITEAETRGMTGYNPMAGPLRMQANNPAQQGLRREYQNLWLAAFSTLPGNTRDPSWAAILQGLEEPYCAFVERLNVALDNGLPEGTP
      
  301 KEPILRSLAYSNANKECQKILQARGHTNSPLGEMLRTCQAWTPKDKTKVLVVQPRRPPPTQPCFRCGKVGHWSRDCTQPRPPPGPCPLCQDPSHWKRDCP
      
  401 QLKPPQEEGEPLLLDLPSTSGTTEEKNSLRGEI
      


2142/2881) score = 14.512 10.928 (total and max score)
>gi|9626730|ref|NP_041006.1| env propeptide [Human T-lymphotropic virus 2]
    1 MGNVFFLLLFSLTHFPLAQQSRCTLTIGISSYHSSPCSPTQPVCTWNLDLNSLTTDQRLHPPCPNLITYSGFHKTYSLYLFPHWIKKPNRQGLGYYSPSY
                                                                                             PNRQGLGYYSPSYND 10.928 (95)
  101 NDPCSLQCPYLGCQAWTSAYTGPVSSPSWKFHSDVNFTQEVSQVSLRLHFSKCGSSMTLLVDAPGYDPLWFITSEPTQPPPTSPPLVHDSDLEHVLTPST
                                                                                 PTQPPPTSPPLVHDS  3.584 (183)
  201 SWTTKILKFIQLTLQSTNYSCMVCVDRSSLSSWHVLYTPNISIPQQTSSRTILFPSLALPAPPSQPFPWTHCYQPRLQAITTDNCNNSIILPPFSLAPVP
      
  301 PPATRRRRAVPIAVWLVSALAAGTGIAGGVTGSLSLASSKSLLLEVDKDISHLTQAIVKNHQNILRVAQYAAQNRRGLDLLFWEQGGLCKAIQEQCCFLN
      
  401 ISNTHVSVLQERPPLEKRVITGWGLNWDLGLSQWAREALQTGITILALLLLVILFGPCILRQIQALPQRLQNRHNQYSLINPETML
      


2721/2881) score =  7.782  4.557 (total and max score)
>gi|9626731|ref|NP_041005.1| tax protein [Human T-lymphotropic virus 2]
    1 MAHFPGFGQSLLYGYPVYVFGDCVQADWCPVSGGLCSTRLHRHALLATCPEHQLTWDPIDGRVVSSPLQYLIPRLPSFPTQRTSRTLKVLTPPTTPVSPK
                                                                                         SRTLKVLTPPTTPVS  4.557 (91)
                                                                                                TPPTTPVSPKVPPAF  3.226 (98)
  101 VPPAFFQSMRKHTPYRNGCLEPTLGDQLPSLAFPEPGLRPQNIYTTWGKTVVCLYLYQLSPPMTWPLIPHVIFCHPRQLGAFLTKVPLKRLEELLYKMFL
      
  201 HTGTVIVLPEDDLPTTMFQPVRAPCIQTAWCTGLLPYHSILTTPGLIWTFNDGSPMISGPYPKAGQPSLVVQSSLLIFEKFETKAFHPSYLLSHQLIQYS
      
  301 SFHNLHLLFDEYTNIPVSILFNKEEADDNGD