v1.1 03.04.09 Phosphorylation prediction results for Hepatitis C virus genotype 2

                                                                                                                  Total     Max
   Rank                                                                                                           Score     Score
 165/2881) gi|157781213|ref|YP_001469630.1| polyprotein [Hepatitis C virus genotype 2]                           307.820   29.496


165/2881) score = 307.820 29.496 (total and max score)
>gi|157781213|ref|YP_001469630.1| polyprotein [Hepatitis C virus genotype 2]
    1 MSTNPKPQRKTKRNTNRRPQDVKFPGGGQIVGGVYLLPRRGPRLGVRATRKTSERSQPRGRRQPIPKDRRSTGKSWGKPGYPWPLYGNEGLGWAGWLLSP
                                                                      IPKDRRSTGKSWGKP 18.517 (72)
                                                                     PIPKDRRSTGKSWGK 15.620 (71)
  101 RGSRPSWGPNDPRHRSRNVGKVIDTLTCGFADLMGYIPVVGAPLGGVARALAHGVRVLEDGVNFATGNLPGCSFSIFLLALLSCITTPVSAAEVKNISTG
      
  201 YMVTNDCTNDSITWQLQAAVLHVPGCVPCEKVGNASQCWIPVSPNVAVQRPGALTQGLRTHIDMVVMSATLCSALYVGDLCGGVMLAAQMFIVSPQHHWF
      
  301 VQDCNCSIYPGTITGHRMAWDMMMNWSPTATMILAYAMRVPEVIIDIISGAHWGVMFGLAYFSMQGAWAKVVVILLLAAGVDARTHTVGGSAAQTTGRLT
      
  401 SLFDMGPRQKIQLVNTNGSWHINRTALNCNDSLHTGFIASLFYTHSFNSSGCPERMSACRSIEAFRVGWGALQYEDNVTNPEDMRPYCWHYPPRQCGVVS
      
  501 AKTVCGPVYCFTPSPVVVGTTDRLGAPTYTWGENETDVFLLNSTRPPLGSWFGCTWMNSSGYTKTCGAPPCRTRADFNASTDLLCPTDCFRKHPDTTYLK
                                                                                                RKHPDTTYLKCGSGP  6.730 (598)
  601 CGSGPWLTPRCLIDYPYRLWHYPCTVNYTIFKIRMYVGGVEHRLTAACNFTRGDRCNLEDRDRSQLSPLLHSTTEWAILPCSYSDLPALSTGLLHLHQNI
      
  701 VDVQFMYGLSPALTKYIVRWEWVILLFLLLADARVCACLWMLILLGQAEAALEKLVILHAASAASCNGFLYFVIFFVAAWYIKGRVVPLATYSLTGLWSF
      
  801 SLLLLALPQQAYAYDASVHGQIGAALLVMITLFTLTPGYKTLLSRFLWWLCYLLTLGEAMVQEWAPPMQVRGGRDGIIWAVAIFYPGVVFDITKWLLAVL
      
  901 GPAYLLKGALTRVPYFVRAHALLRMCTMARHLAGGRYVQMALLALGRWTGTYIYDHLTPMSDWAASGLRDLAVAVEPIIFSPMEKKVIVWGAETAACGDI
      
 1001 LHGLPVSARLGREVLLGPADGYTSKGWSLLAPITAYAQQTRGLLGTIVVSMTGRDKTEQAGEIQVLSTVTQSFLGTSISGVLWTVYHGAGNKTLAGSRGP
      
 1101 VTQMYSSAEGDLVGWPSPPGTKSLEPCTCGAVDLYLVTRNADVIPARRRGDKRGALLSPRPLSTLKGSSGGPVLCPRGHAVGVFRAAVCSRGVAKSIDFI
               GDLVGWPSPPGTKSL 16.840 (1117)            DKRGALLSPRPLSTL 15.940 (1158)
 1201 PVETLDIVTRSPTFSDNSTPPAVPQTYQVGYLHAPTGSGKSTKVPVAYAAQGYKVLVLNPSVAATLGFGAYLSKAHGINPNIRTGVRTVTTGAPITYSTY
                 PTFSDNSTPPAVPQT  2.716 (1219)
 1301 GKFLADGGCAGGAYDIIICDECHAVDSTTILGIGTVLDQAETAGVRLTVLATATPPGSVTTPHPNIEEVALGQEGEIPFYGRAIPLSYIKGGRHLIFCHS
      
 1401 KKKCDELAAALRGMGLNSVAYYRGLDVSVIPTQGDVVVVATDALMTGYTGDFDSVIDCNVAVTQVVDFSLDPTFTITTQIVPQDAVSRSQRRGRTGRGRL
      
 1501 GIYRYVSTGERASGMFDSVVLCECYDAGAAWYELTPSETTVRLRAYFNTPGLPVCQDHLEFWEAVFTGLTHIDAHFLSQTKQSGENFAYLTAYQATVCAR
      
 1601 AKAPPPSWDVMWKCLTRLKPTLVGPTPLLYRLGSVTNEVTLTHPVTKYIATCMQADLEVMTSTWVLAGGVLAAVAAYCLATGCVCIIGRLHINQRAVVAP
                                PLLYRLGSVTNEVTL 13.351 (1634)
 1701 DKEVLYEAFDEMEECASRAALIEEGQRIAEMLKSKIQGLLQQASKQAQDIQPTVQASWPKVEQFWAKHMWNFISGIQYLAGLSTLPGNPAVASMMAFSAA
      
 1801 LTSPLSTSTTILLNILGGWLASQIAPPAGATGFVVSGLVGAAVGSIGLGKVLVDILAGYGAGISGALVAFKIMSGEKPSMEDVVNLLPGILSPGALVVGV
      
 1901 ICAAILRRHVGPGEGAVQWMNRLIAFASRGNHVAPTHYVTESDASQRVTQLLGSLTITSLLRRLHNWITEDCPIPCGGSWLRDVWDWVCTILTDFKNWLT
      
 2001 SKLFPKMPGLPFVSCQKGYKGVWAGTGIMTTRCPCGANISGNVRLGSMRITGPKTCMNIWQGTFPINCYTEGQCVPKPAPNFKVAIWRVAASEYAEVTQH
      
 2101 GSYHYITGLTTDNLKVPCQLPSPEFFSWVDGVQIHRFAPTPKPFFRDEVSFCVGLNSFVVGSQLPCDPEPDTDVLMSMLTDPSHITAETAARRLARGSPP
                                                                                                ARRLARGSPPSEASS 29.496 (2198)
                                                                                                   LARGSPPSEASSSAS 12.616 (2201)
 2201 SEASSSASQLSAPSLRATCTTHGKAYDVDMVDANLFMGGDVTRIESGSKVVVLDSLDPMVEERSDLEPSIPSEYMLPKKRFPPALPAWARPDYNPPLVES
                                                              DPMVEERSDLEPSIP  3.944 (2264)
 2301 WKRPDYQPATVAGCALPPPRKTPTPPPRRRRTVGLSEDSIGDALQQLAIKSFGQPPPSGDSGLSTGAGAADSGSQTPPDELALSETGSISSMPPLEGELG
                      PPPRKTPTPPPRRRR 19.188 (2324)                     AGAADSGSQTPPDEL 12.919 (2374)
                    ALPPPRKTPTPPPRR 18.049 (2322)                         AADSGSQTPPDELAL  3.400 (2376)
                              PPPRRRRTVGLSEDS 16.747 (2332)
                      PPPRKTPTPPPRRRR  3.942 (2324)
 2401 DPDLEPEQVEPQPPPQGGVAAPGSDSGSWSTCSEEDDSVVCCSMSYSWTGALITPCSPEEEKLPINPLSNSLLRYHNKVYCTTTKSASLRAKKVTFDRMQ
                      GGVAAPGSDSGSWST 16.098 (2424)                                                     MQVLDSYYDSVLKDI  7.256 (2506)
                          APGSDSGSWSTCSEE 13.632 (2428)
                               SGSWSTCSEEDDSVV  7.628 (2433)
 2501 VLDSYYDSVLKDIKLAASKVTARLLTMEEACQLTPPHSARSKYGFGAKEVRSLSGRAVNHIKSVWKDLLEDSETPIPTTIMAKNEVFCVDPTKGGKKAAR
                                MEEACQLTPPHSARS 11.168 (2534)
 2601 LIVYPDLGVRVCEKMALYDITQKLPQAVMGASYGFQYSPAQRVEFLLKAWAEKKDPMGFSYDTRCFDSTVTERDIRTEESIYRACSLPEEAHTAIHSLTE
      
 2701 RLYVGGPMFNSKGQTCGYRRCRASGVLTTSMGNTITCYVKALAACKAAGIIAPTMLVCGDDLVVISESQGTEEDERNLRAFTEAMTRYSAPPGDPPRPEY
                                                                  DLVVISESQGTEEDE 23.484 (2768)
                                                                  DLVVISESQGTEEDE  7.168 (2768)
 2801 DLELITSCSSNVSVALGPQGRRRYYLTRDPTTPIARAAWETVRHSPVNSWLGNIIQYAPTIWARMVLMTHFFSILMAQDTLDQNLNFEMYGAVYSVSPLD
      
 2901 LPAIIERLHGLDAFSLHTYTPHELTRVASALRKLGAPPLRAWKSRARAVRASLISRGGRAAVCGRYLFNWAVKTKLKLTPLPEARLLDLSSWFTVGAGGG
                                                                                                     GAGGGDIYHSVSRAR 11.371 (3003)
 3001 DIYHSVSRARPRLLLFGLLLLFVGVGLFLLPAR