v1.1 03.04.09 Phosphorylation prediction results for Chikungunya virus

                                                                                                                  Total     Max
   Rank                                                                                                           Score     Score
 318/2881) gi|22789217|ref|NP_690588.1| nonstructural polyprotein [Chikungunya virus]                            377.116   25.539
1096/2881) gi|27754752|ref|NP_690589.2| structural polyprotein [Chikungunya virus]                                64.625   17.092


318/2881) score = 377.116 25.539 (total and max score)
>gi|22789217|ref|NP_690588.1| nonstructural polyprotein [Chikungunya virus]
    1 MDPVYVDIDADSAFLKALQRAYPMFEVEPRQVTPNDHANARAFSHLAIKLIEQEIDPDSTILDIGSAPARRMMSDRKYHCVCPMRSAEDPERLANYARKL
                                                                            RMMSDRKYHCVCPMR 10.129 (78)
  101 ASAAGKVLDRNISGKIGDLQAVMAVPDTETPTFCLHTDVSCRQRADVAIYQDVYAVHAPTSLYHQAIKGVRLAYWVGFDTTPFMYNAMAGAYPSYSTNWA
      
  201 DEQVLKAKNIGLCSTDLTEGRRGKLSIMRGKKLEPCDRVLFSVGSTLYPESRKLLKSWHLPSVFHLKGKLSFTCRCDTVVSCEGYVVKRITMSPGLYGKT
                                                                                               ITMSPGLYGKTTGYA  8.419 (297)
                                                                                           VVKRITMSPGLYGKT  3.220 (293)
  301 TGYAVTHHADGFLMCKTTDTVDGERVSFSVCTYVPATICDQMTGILATEVTPEDAQKLLVGLNQRIVVNGRTQRNTNTMKNYMIPVVAQAFSKWAKECRK
                                                                                NTNTMKNYMIPVVAQ  9.271 (382)
  401 DMEDEKLLGVRERTLTCCCLWAFKKQKTHTVYKRPDTQSIQKVQAEFDSFVVPSLWSSGLSIPLRTRIKWLLSKVPKTDLTPYSGDAQEARDAEKEAEEE
      
  501 REAELTLEALPPLQAAQEDVQVEIDVEQLEDRAGAGIIETPRGAIKVTAQPTDHVVGEYLVLSPQTVLRSQKLSLIHALAEQVKTCTHSGRAGRYAVEAY
      
  601 DGRVLVPSGYAISPEDFQSLSESATMVYNEREFVNRKLHHIAMHGPALNTDEESYELVRAERTEHEYVYDVDQRRCCKKEEAAGLVLVGDLTNPPYHEFA
                                                                   RTEHEYVYDVDQRRC 25.539 (669)    PPYHEFAYEGLKIRP 11.803 (701)
                                                     LNTDEESYELVRAER 11.311 (655)             GDLTNPPYHEFAYEG -0.901 (696)
                                                     LNTDEESYELVRAER  9.332 (655)
                                                MHGPALNTDEESYEL  2.942 (650)
  701 YEGLKIRPACPYKIAVIGVFGVPGSGKSAIIKNLVTRQDLVTSGKKENCQEITTDVMRQRGLEISARTVDSLLLNGCNRPVDVLYVDEAFACHSGTLLAL
      
  801 IALVRPRQKVVLCGDPKQCGFFNMMQMKVNYNHNICTQVYHKSISRRCTLPVTAIVSSLHYEGKMRTTNEYNKPIVVDTTGSTKPDPGDLVLTCFRGWVK
                                               KSISRRCTLPVTAIV 13.423 (849)
                                                                     KMRTTNEYNKPIVVD 10.664 (871)
  901 QLQIDYRGHEVMTAAASQGLTRKGVYAVRQKVNENPLYASTSEHVNVLLTRTEGKLVWKTLSGDPWIKTLQNPPKGNFKATIKEWEVEHASIMAGICSHQ
                                    KVNENPLYASTSEHV 10.763 (938)
                                    KVNENPLYASTSEHV  3.712 (938)
 1001 MTFDTFQNKANVCWAKSLVPILETAGIKLNDRQWSQIIQAFKEDKAYSPEVALNEICTRMYGVDLDSGLFSKPLVSVYYADNHWDNRPGGKMFGFNPEAA
                                              FKEDKAYSPEVALNE 15.623 (1048)
                                             AFKEDKAYSPEVALN 10.003 (1047)
 1101 SILERKYPFTKGKWNINKQICVTTRRIEDFNPTTNIIPANRRLPHSLVAEHRPVKGERMEWLVNKINGHHVLLVSGCSLALPTKRVTWVAPLGVRGADYT
      
 1201 YNLELGLPATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRALKPPCVTSNTEMFFL
      
 1301 FSNFDNGRRNFTTHVMNNQLNAAFVGQATRAGCAPSYRVKRMDIAKNDEECVVNAANPRGLPGDGVCKAVYKKWPESFKNSATPVGTAKTVMCGTYPVIH
                                                                                 ESFKNSATPVGTAKT 12.456 (1383)
                                                                                                         HAVGPNFSNYSESEG  6.886 (1407)
 1401 AVGPNFSNYSESEGDRELAAAYREVAKEVTRLGVNSVAIPLLSTGVYSGGKDRLTQSLNHLFTAMDSTDADVVIYCRDKEWEKKISEAIQMRTQVELLDE
        GPNFSNYSESEGDRE 14.311 (1410)                                    TDADVVIYCRDKEWE  8.940 (1475)
          NFSNYSESEGDRELA 10.519 (1412)
        GPNFSNYSESEGDRE  7.516 (1410)
 1501 HISIDCDVVRVHPDSSLAGRKGYSTTEGALYSYLEGTRFHQTAVDMAEIYTMWPKQTEANEQVCLYALGESIESIRQKCPVDDADASSPPKTVPCLCRYA
                                                                                      VDDADASSPPKTVPC  6.204 (1588)
 1601 MTPERVTRLRMNHVTSIIVCSSFPLPKYKIEGVQKVKCSKVMLFDHNVPSRVSPREYRPSQESVQEASTTTSLTHSQFDLSVDGKILPVPSDLDADAPAL
                                                          SPREYRPSQESVQEA 20.321 (1660)  GKILPVPSDLDADAP  3.434 (1691)
                                                             EYRPSQESVQEASTT 15.573 (1663)
 1701 EPALDDGAIHTLPSATGNLAAVSDWVMSTVPVAPPRRRRGRNLTVTCDEREGNITPMASVRFFRAELCPVVQETAETRDTAMSLQAPPSTATELSHPPIS
                                                     DEREGNITPMASVRF 13.576 (1755)
 1801 FGAPSETFPITFGDFNEGEIESLSSELLTFGDFLPGEVDDLTDSDWSTCSDTDDELRLDRAGGYIFSSDTGPGHLQQKSVRQSVLPVNTLEEVHEEKCYP
                                          EVDDLTDSDWSTCSD 16.889 (1844)
                                                  DWSTCSDTDDELRLD 14.893 (1852)
                                                DSDWSTCSDTDDELR 14.174 (1850)
                                        PGEVDDLTDSDWSTC 12.767 (1842)
                                                              RLDRAGGYIFSSDTG  8.759 (1864)
                                             DLTDSDWSTCSDTDD  7.202 (1847)
 1901 PKLDEAKEQLLLKKLQESASMANRSRYQSRKVENMKATIIQRLKRGCRLYLMSETPKVPTYRTTYPAPVYSPPINVRLSNPESAVAACNEFLARNYPTVS
                       SASMANRSRYQSRKV 17.639 (1925)
 2001 SYQITDEYDAYLDMVDGSESCLDRATFNPSKLRSYPKQHAYHAPSIRSAVPSPFQNTLQNVLAAATKRNCNVTQMRELPTLDSAVFNVECFKKFACNQEY
                                       SYPKQHAYHAPSIRS  9.802 (2041)
 2101 WEEFAASPIRITTENLTTYVTKLKGPKAAALFAKTHNLLPLQEVPMDRFTVDMKRDVKVTPGTKHTEERPKVQVIQAAEPLATAYLCGIHRELVRRLNAV
      
 2201 LLPNVHTLFDMSAEDFDAIIAAHFKPGDTVLETDIASFDKSQDDSLALTALMLLEDLGVDHSLLDLIEAAFGEISSCHLPTGTRFKFGAMMKSGMFLTLF
      
 2301 VNTLLNITIASRVLEDRLTKSACAAFIGDDNIIHGVVSDELMAARCATWMNMEVKIIDAVVSQKAPYFCGGFILHDIVTGTACRVADPLKRLFKLGKPLA
      
 2401 AGDEQDEDRRRALADEVVRWQRTGLIDELEKAVYSRYEVQGISVVVMSMATFASSRSNFEKLRGPVVTLYGGPK
      


1096/2881) score = 64.625 17.092 (total and max score)
>gi|27754752|ref|NP_690589.2| structural polyprotein [Chikungunya virus]
    1 MEFIPTQTFYNRRYQPRPWTPRPTIQVIRPRPRPQRQAGQLAQLISAVNKLTMRAVPQQKPRKNRKNKKQKQKQQAPQNNTNQKKQPPKKKPAQKKKKPG
      
  101 RRERMCMKIENDCIFEVKHEGKVTGYACLVGDKVMKPAHVKGTIDNADLAKLAFKRSSKYDLECAQIPVHMKSDASKFTHEKPEGYYNWHHGAVQYSGGR
                                                                                     HEKPEGYYNWHHGAV 13.014 (187)
  201 FTIPTGAGKPGDSGRPIFDNKGRVVAIVLGGANEGARTALSVVTWNKDIVTKITPEGAEEWSLAIPVMCLLANTTFPCSQPPCIPCCYEKEPEETLRMLE
      
  301 DNVMRPGYYQLLQASLTCSPHRQRRSTKDNFNVYKATRPYLAHCPDCGEGHSCHSPVALERIRNEATDGTLKIQVSLQIGIGTDDSHDWTKLRYMDNHIP
                         PHRQRRSTKDNFNVY 17.092 (327)
                         PHRQRRSTKDNFNVY  6.106 (327)
  401 ADAGRAGLFVRTSAPCTITGTMGHFILARCPKGETLTVGFTDSRKISHSCTHPFHHDPPVIGREKFHSRPQHGKELPCSTYVQSNAATAEEIEVHMPPDT
      
  501 PDRTLLSQQSGNVKITVNSQTVRYKCNCGGSNEGLITTDKVINNCKVDQCHAAVTNHKKWQYNSPLVPRNAELGDRKGKIHIPFPLANVTCMVPKARNPT
      
  601 VTYGKNQVIMLLYPDHPTLLSYRSMGEEPNYQEEWVTHKKEVVLTVPTEGLEVTWGNNEPYKYWPQLSANGTAHGHPHEIILYYYELYPTMTVVVVSVAS
                             SMGEEPNYQEEWVTH 11.829 (631)
                      PTLLSYRSMGEEPNY  3.455 (624)
  701 FILLSMVGMAVGMCMCARRRCITPYELTPGATVPFLLSLICCIRTAKAATYQEAAVYLWNEQQPLFWLQALIPLAALIVLCNCLRLLPCCCKTLAFLAVM
      
  801 SIGAHTVSAYEHVTVIPNTVGVPYKTLVNRPGYSPMVLEMELLSVTLEPTLSLDYITCEYKTVIPSPYVKCCGTAECKDKNLPDYSCKVFTGVYPFMWGG
      
  901 AYCFCDAENTQLSEAHVEKSESCKTEFASAYRAHTASASAKLRVLYQGNNITVTAYANGDHAVTVKDAKFIVGPMSSAWTPFDNKIVVYKGDVYNMDYPP
                  SEAHVEKSESCKTEF 13.128 (920)
 1001 FGAGRPGQFGDIQSRTPESKDVYANTQLVLQRPAAGTVHVPYSQAPSGFKYWLKERGASLQHTAPFGCQIATNPVRAMNCAVGNMPISIDIPDAAFTRVV
      
 1101 DAPSLTDMSCEVPACTHSSDFGGVAIIKYAVSKKGKCAVHSMTNAVTIREAEIEVEGNSQLQISFSTALASAEFRVQVCSTQVHCAAECHPPKDHIVNYP
      
 1201 ASHTTLGVQDISATAMSWVQKITGGVGLVVAVAALILIVVLCVSFSRH