v1.1 03.04.09 Phosphorylation prediction results for Chapare virus

                                                                                                                  Total     Max
   Rank                                                                                                           Score     Score
 886/2881) gi|172088176|ref|YP_001816785.1| L polymerase [Chapare virus]                                         175.409   18.482
1468/2881) gi|172088173|ref|YP_001816783.1| nucleocapsid protein [Chapare virus]                                  17.396   15.012
2366/2881) gi|172088172|ref|YP_001816782.1| glycoprotein precursor [Chapare virus]                                 8.834    8.834


886/2881) score = 175.409 18.482 (total and max score)
>gi|172088176|ref|YP_001816785.1| L polymerase [Chapare virus]
    1 MDTFLLELKDLVRKYVPELVELSFQKDALLSQVHPRLVLVEGFKLLSLLVELESCKVNACRHNFEQKFVDVILSDHGVICPTLPKVTPDGFNLMGKTLIL
      
  101 LETFVRVNPNDFERKWKADMSKLMSLKDDLARVGITMVPVVDGRGSYNTSYLPEWATERLRWLLIEILKGVKATSEIEIEDQEYQRLIHSLAKANNQSMG
                                             VVDGRGSYNTSYLPE 10.985 (147)
  201 FENLEFLKRRLLSYDQLLDTSLLVGIRNDVRESKIIEELIKIKLWYKTEIFNKGLGKFKRTNKSNLLSDLLKIGLHQDSDTINCMFCSCKILELCYTLSN
                                                                                                         NKLSIDHSKEEMKDD  4.669 (307)
  301 KLSIDHSKEEMKDDEVGGKQPVCISYSSLLSICNKIKGSKIFNTRRNTLLFLDLIMLNFIVDEMIQDDSVVDSLRGAGFIIGQMVVLVNDRALDILAAMK
      
  401 LIRHKLGNSKDWLSVCGKVLKRYDEEMWKEVKTYIKEPDFDMLFQLAKSLVSERPIMRYTVHKDNESRCLHQNSLNISDQSFKAMLKALSHVSLSLINSM
      
  501 KTSFSSRLLINEKDYSRYYGNVRLKECYVQRFPISSRVTGYLFYQKTGERSRCYSLYISENGELSELGSFYCDPKRFFLPVFSEDTIVSMCNEMVCWLDF
                                                 YQKTGERSRCYSLYI 16.041 (551)
                                                     GERSRCYSLYISENG  6.033 (555)
  601 DEQLVELVKPKLRSLVLLLLCSPSKRNQTFIQGLRYFIMAYANQAHHVDLMSKLEIECKSSSEIQLQRLAVTLFELVLSTGDDKDFGFARRFKFLLNISY
      
  701 LCHFVTKETPDRLTDQIKCFEKFLEPKLNFNSVIVNPSLSGILTEAQEEIMTSSVNRFFQKNLTNISDVKEPGVSKELISFCVSLFNRGKLRVSGDLKVD
      
  801 PFRPSFTSTALDLSSNKSVVVPKLDELGNALSKYDKQMMISSCVTTLTEMFKTKGRYNLDPDSLDFLVLKNLSNLVSVSVSKGQMKEELSLLYDTLSEEQ
                                                                                           KEELSLLYDTLSEEQ  9.480 (893)
  901 LESFEQIKQDVQLTLSRMKESKCNNVGLGNSRKVNKHLSKSELLETLWSPYQVLRAIKNEVSIHEIKDFDPDIIEHETVKKLCDEVYQSSNKLEFFLEEP
                                                                                     KKLCDEVYQSSNKLE 15.985 (987)
 1001 LKSVPLEFLLKNLTTIAYEETDYLECFKYLLIQGGFDQKLGSYEHKSRSRLGLSSEALRVQEDARVSTRESNAEAIAKKLDKTFFTSAALRNLCFYSEDS
                     IAYEETDYLECFKYL  7.890 (1023)               VQEDARVSTRESNAE 15.881 (1067) LRNLCFYSEDSPTEF  7.369 (1097)
                                         FDQKLGSYEHKSRSR  7.179 (1043)
 1101 PTEFTSVSTNTGNLKFGLSYKEQVGSNRELYVGDLNTKLMTRLVEDFSEMITSSMRYSCLNSEKEFERAICDMKMAVNNGDISMSLDHSKWGPHMSPALF
      
 1201 YSFLANLNLTEPKSRAKLNLGPLLDILKWHLHKVVEVPFNVAQAYCVGKIKRSLGLMECQTSSVTEQFYHNFLQRENEIPSHIMSVLDMGQGILHNLSDL
      
 1301 YALITEQFLNYAIYKLYDVDVLSYTSSDDQISIMKLPAYEHIDEDSPDWLEIVCFHEYLSSKLNKFVSPKSVVGNFVAEFKSRFFVMGEETPLLTKFVAA
                       DVDVLSYTSSDDQIS 13.434 (1325)              SKLNKFVSPKSVVGN 18.482 (1368)
                                     SIMKLPAYEHIDEDS  7.443 (1339)
 1401 ALHNVRCKTPTQLAETVDTICDQCVANGVSVSIVSKISERVNRLVKYSGFGETPFLSVVKQDVKDWSDGSRGYRLQRNIENSLRDSKILEVMRKGARKVF
      
 1501 LGIKNGRIFEENLIGLIGRGGDEALRGFLLYAEVDKDEIENALRYRWVNTSTFGDLRLVLRTKIMSSKRVLERESIPSLVKTLQSRMSKNFTKGAKKILA
      
 1601 ESINKSAFQSSVASGFIGFCKSMGSKCVRDGSGGFIYLKDIYKKITTCECKHCSVWRGVVYCEKSVEKIFQFTRSIMWDYFTLVLTNACELGEWVFSSVK
      
 1701 LPTKATILDNPNLFWAIKPRTHKHIEDRLGLNHILHSIKKNYPQLFEEHLAPFMSDLQSNQMINPSKIKFLDICVALDMVNENLGIIGHLLRGRNNTIYI
      
 1801 VKQSECAGAHVRQADYVDQDLGLSPQQICYNFKVQFLLSSMINPLIVSTSTLRSFFWFNEVLSIEEDDQIELGELTDFTLSIKTYNLERAMTLDDMTMGY
                                                             FWFNEVLSIEEDDQI  5.721 (1863)
 1901 VCSTLLDEVVSLESLDSCQDLAALQFKRQDLSDFFRDLGEDFVKVGLNIQIVHQRRSTKFDISRKVVYTFRILLLINLSEHLREEVKIPVQSLSLYASGA
      
 2001 GNNHLFLDGVSMIPTLPLFNGSKSVNLAKVLIEHELATSNDFKLLECVIMDFSNFLDELRDKYSYVLVGPEEQENPIVFQNGAFMADNQKLSYMRVEIFG
                                                               ELRDKYSYVLVGPEE 10.809 (2065)
 2101 DTIVKALGALETDREIENLLCNLWPYLKSIKKTIDFNQADFEMIYDLHRTALLKSLCQMDSWIEFTSFSVAYSKHLQDLVVSDNLGNLRLKGITCRPFRR
          KALGALETDREIENL  7.480 (2112)    QADFEMIYDLHRTAL 10.528 (2145)
 2201 DQCIQEIE
      


1468/2881) score = 17.396 15.012 (total and max score)
>gi|172088173|ref|YP_001816783.1| nucleocapsid protein [Chapare virus]
    1 MSNSKEIPSFRWTQSLRRELSSFTIPVKSDVLKDAKMIADGLDFSQVALVQRVLRKTKRTDGDLDKLRDLNREVDNLMAMKSAQKNTILKLGDLNKSELM
                                                                                                      SELMDLASDLEKLKK  2.384 (104)
  101 DLASDLEKLKKKVGQTERSPVGGVYLGNLSQSQLSKRTDLLRRLGFQQPQVRSTGVVRIWDVADPTRLNNQFGSVPALTIACMTVQGGDTMGNVVQALTS
      
  201 LGLLYTVKFPNLADLEKLAAEHDCLQIITKDESAINISGYNFSLSAAVKAGATFLDGGNMLETIKVTPDNFSTIIKTVLGVKKRENMFIDERPGNRNPYE
      
  301 NLLYKLCLSGEGWPYIGSRSQVKGRSWENTTVDLSLKPTQGPKAPEKVGLNVRLSHLTEIQESVVREAMSKINPSHTTWIDIEGTSNDPVELALYQPESG
      
  401 NYILCYRKPHDEKGFKNGSRHSHGMLLKDLESAQPGLLSYIIGLLPQDMVLTAQGSDDIKRLLDTHGRKDLKVVDVKLSSDQARNYEEQVWSDFGHLCKK
      
  501 HNGVVVPKKKKDKDPSQSTEPHCALLDCLMFQSVIDGQPPQIKLQSLLPEVLLFTMKPAFAI
              KKKDKDPSQSTEPHC 15.012 (516)


2366/2881) score =  8.834  8.834 (total and max score)
>gi|172088172|ref|YP_001816782.1| glycoprotein precursor [Chapare virus]
    1 MGQLVSFFQEIPNIIQEAINIALIAVSLIAILKGLVNLWKSGLFQLLVFLILAGRSCSFKIGRSTELQNITINMLKVFEDHPISCTVNKTLYYIRESENA
      
  101 TWCVEIAALDMSVLLSPHDPRVMGNLSNCVHPDIKHRSELLGLLEWILRALKYDFLNYPPLLCEKVTSSVNETRIQINVSDSAGSHDFKETMLQRLAILF
      
  201 GTKLMFDKTPKQFIVIRNQTWVNQCKSNHVNTLHLMMANAGHAVKLRRLQGVFTWTITDAAGNDMPGGYCLERWMLVTSDLKCFGNTALAKCNLNHDSEF
                                                                   GNDMPGGYCLERWML  8.834 (269)
  301 CDMLKLFEFNKKAIESLNDNTKNKVNLLTHSINALISDNLLMKNRLKELLDTPYCNYTKFWYVNHTITGEHSLPRCWMVKNNSYLNESEFRNDWILESDH
      
  401 LLSEMLNKEYFDRQGKTPITLVDICFWSTLFFTTTLFLHLVGFPTHRHIQGEPCPLPHKLNSNGGCRCGRYPELKKPTTWHRKH